Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL27A1Q8IZC6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
COL27A1Q8IZC6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 AC093214.1-201ENST00000511688 1107 ntBASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
COL27A1Q8IZC6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 FLJ13224-201ENST00000313737 1514 ntBASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 FAM58DP-201ENST00000428076 619 ntBASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 AC004449.1-201ENST00000564240 433 ntBASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.39■□□□□ 0.21
COL27A1Q8IZC6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 AC069335.1-201ENST00000489972 472 ntBASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL27A1Q8IZC6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms