Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 AP003071.4-201ENST00000562276 1284 ntBASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 AC010240.3-201ENST00000607688 395 ntBASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM42Q8IWZ5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 AC009949.1-201ENST00000623048 1830 ntBASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CRYGFP-201ENST00000418459 633 ntBASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 AC018695.7-201ENST00000624587 2492 ntBASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM42Q8IWZ5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 LINC00167-201ENST00000530583 1419 ntBASIC17.58■□□□□ 0.41
TRIM42Q8IWZ5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM42Q8IWZ5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms