Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 AL354751.1-201ENST00000412768 1863 ntBASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCN4BQ8IWT1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCN4BQ8IWT1 AC243591.1-201ENST00000452967 1364 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 IL9RP2-201ENST00000423948 1312 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 AC019129.2-201ENST00000609837 1235 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 BX640515.1-201ENST00000617215 977 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 AL353593.2-201ENST00000602529 1483 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 AC132938.5-201ENST00000624980 1813 ntBASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCN4BQ8IWT1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 KLF4P1-201ENST00000412782 1185 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 SPDYE21P-201ENST00000413323 827 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 IGHV3-52-201ENST00000519770 353 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AC139887.3-201ENST00000568585 713 ntBASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AL022326.1-202ENST00000641533 845 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms