Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 PCDHA12-202ENST00000613593 2588 ntBASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC00346Q8IVM7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CROCCP1-201ENST00000426910 5675 ntBASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 AL671277.2-201ENST00000458060 996 ntBASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 DUX4L26-201ENST00000489078 1255 ntBASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC00346Q8IVM7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 BX276092.7-203ENST00000637198 1536 ntBASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 TMPOP1-202ENST00000424642 1267 ntBASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC00346Q8IVM7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms