Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 POM121L13P-201ENST00000422362 380 ntBASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TSPY6P-201ENST00000448518 926 ntBASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LYSMD2Q8IV50 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 SDHAP2-201ENST00000455183 2001 ntBASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD2Q8IV50 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 IKBKGP1-201ENST00000612193 1073 ntBASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms