Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AC005104.2-201ENST00000427818 678 ntBASIC16.3■□□□□ 0.2
VRK2Q86Y07 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
VRK2Q86Y07 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VRK2Q86Y07 AC010460.3-201ENST00000511359 1579 ntBASIC16.3■□□□□ 0.2
VRK2Q86Y07 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.3■□□□□ 0.2
VRK2Q86Y07 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 AC096633.1-201ENST00000422446 749 ntBASIC16.29■□□□□ 0.2
VRK2Q86Y07 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 LINC01238-205ENST00000567549 1107 ntBASIC16.29■□□□□ 0.2
VRK2Q86Y07 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VRK2Q86Y07 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.29■□□□□ 0.2
VRK2Q86Y07 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 TSPY22P-201ENST00000427496 604 ntBASIC16.28■□□□□ 0.2
VRK2Q86Y07 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.28■□□□□ 0.2
VRK2Q86Y07 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.28■□□□□ 0.2
VRK2Q86Y07 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.28■□□□□ 0.2
VRK2Q86Y07 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
VRK2Q86Y07 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VRK2Q86Y07 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms