Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYVN1Q86TM6 KRT89P-201ENST00000620027 1478 ntBASIC17.33■□□□□ 0.37
SYVN1Q86TM6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 KRT18P65-201ENST00000439811 1286 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AP000867.3-201ENST00000524675 377 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC012615.1-201ENST00000565797 1299 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC005332.3-201ENST00000589904 676 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AL121772.3-201ENST00000610840 674 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 CROCCP2-202ENST00000412962 2773 ntBASIC17.33■□□□□ 0.36
SYVN1Q86TM6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYVN1Q86TM6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 PCDHA12-202ENST00000613593 2588 ntBASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 AL845331.1-201ENST00000424978 1190 ntBASIC17.32■□□□□ 0.36
SYVN1Q86TM6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 AL390719.2-201ENST00000606993 987 ntBASIC17.32■□□□□ 0.36
SYVN1Q86TM6 AC116407.2-201ENST00000613639 860 ntBASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 HLA-J-201ENST00000462773 1622 ntBASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYVN1Q86TM6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 TOB2P1-201ENST00000469761 992 ntBASIC17.31■□□□□ 0.36
SYVN1Q86TM6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 LINC01711-201ENST00000598340 967 ntBASIC17.31■□□□□ 0.36
SYVN1Q86TM6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SYVN1Q86TM6 AC004263.2-201ENST00000617183 678 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms