Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SQSTM1-206ENST00000466342 808 ntTSL 212.25□□□□□ -0.453e-8■□□□□ 8.1
SND1Q7KZF4 MS4A3-206ENST00000528298 486 ntTSL 312.11□□□□□ -0.475e-7■□□□□ 8.1
SND1Q7KZF4 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC12.1□□□□□ -0.472e-6■□□□□ 8.1
SND1Q7KZF4 G3BP2-211ENST00000507947 665 ntTSL 211.97□□□□□ -0.492e-6■□□□□ 8.1
SND1Q7KZF4 SQSTM1-203ENST00000422245 628 ntTSL 411.9□□□□□ -0.53e-8■□□□□ 8.1
SND1Q7KZF4 DAZAP2-203ENST00000436900 1811 ntTSL 511.9□□□□□ -0.52e-9■□□□□ 8.1
SND1Q7KZF4 AP2B1-218ENST00000619183 1595 ntTSL 511.76□□□□□ -0.532e-6■□□□□ 8.1
SND1Q7KZF4 DAZAP2-205ENST00000449723 2098 ntTSL 5 BASIC11.74□□□□□ -0.532e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC11.48□□□□□ -0.572e-9■□□□□ 8.1
SND1Q7KZF4 DGUOK-204ENST00000462551 573 ntTSL 210.76□□□□□ -0.692e-6■□□□□ 8.1
SND1Q7KZF4 DGUOK-206ENST00000489796 692 ntTSL 310.74□□□□□ -0.692e-6■□□□□ 8.1
SND1Q7KZF4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC10.55□□□□□ -0.722e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC10.55□□□□□ -0.722e-9■□□□□ 8.1
SND1Q7KZF4 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.732e-6■□□□□ 8.1
SND1Q7KZF4 CENPK-205ENST00000505960 834 ntTSL 510.26□□□□□ -0.773e-8■□□□□ 8.1
SND1Q7KZF4 ATP5F1-203ENST00000464154 621 ntTSL 210.23□□□□□ -0.774e-13■□□□□ 8.1
SND1Q7KZF4 RPS17-206ENST00000560612 1877 ntTSL 29.78□□□□□ -0.844e-32■□□□□ 8.1
SND1Q7KZF4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.29□□□□□ -0.923e-8■□□□□ 8.1
SND1Q7KZF4 ARPC3-203ENST00000467622 1098 ntTSL 59.27□□□□□ -0.932e-6■□□□□ 8.1
SND1Q7KZF4 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-9■□□□□ 8.1
SND1Q7KZF4 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC9.01□□□□□ -0.974e-32■□□□□ 8.1
SND1Q7KZF4 G3BP2-210ENST00000507745 584 ntTSL 48.57□□□□□ -1.042e-6■□□□□ 8.1
SND1Q7KZF4 RPL5-203ENST00000461952 1116 ntTSL 28.56□□□□□ -1.042e-15■□□□□ 8.1
SND1Q7KZF4 DAZAP2-212ENST00000551919 485 ntTSL 48.5□□□□□ -1.052e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.4□□□□□ -1.062e-9■□□□□ 8.1
SND1Q7KZF4 ADH5-209ENST00000512604 331 ntTSL 38.31□□□□□ -1.081e-10■□□□□ 8.1
SND1Q7KZF4 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.27□□□□□ -1.093e-8■□□□□ 8.1
SND1Q7KZF4 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.26□□□□□ -1.092e-9■□□□□ 8.1
SND1Q7KZF4 RPS17-207ENST00000560639 932 ntTSL 58.15□□□□□ -1.14e-32■□□□□ 8.1
SND1Q7KZF4 CENPK-217ENST00000515873 279 ntTSL 57.74□□□□□ -1.173e-8■□□□□ 8.1
SND1Q7KZF4 PGD-210ENST00000498356 790 ntTSL 37.73□□□□□ -1.175e-7■□□□□ 8.1
SND1Q7KZF4 CENPK-212ENST00000510768 725 ntTSL 57.58□□□□□ -1.23e-8■□□□□ 8.1
SND1Q7KZF4 ARPC3-206ENST00000476566 362 ntTSL 27.54□□□□□ -1.22e-6■□□□□ 8.1
SND1Q7KZF4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.212e-9■□□□□ 8.1
SND1Q7KZF4 ADH5-205ENST00000505652 623 ntTSL 57.27□□□□□ -1.251e-10■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-208ENST00000465122 894 ntTSL 37.24□□□□□ -1.252e-6■□□□□ 8.1
SND1Q7KZF4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.2□□□□□ -1.262e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-208ENST00000548878 532 ntTSL 57.14□□□□□ -1.272e-6■□□□□ 8.1
SND1Q7KZF4 AP2B1-201ENST00000587805 690 ntTSL 27□□□□□ -1.292e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-202ENST00000426440 349 ntTSL 36.94□□□□□ -1.32e-6■□□□□ 8.1
SND1Q7KZF4 AP2B1-203ENST00000588116 779 ntTSL 56.68□□□□□ -1.342e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-207ENST00000547365 308 ntTSL 26.54□□□□□ -1.362e-6■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-209ENST00000473593 540 ntTSL 26.2□□□□□ -1.422e-6■□□□□ 8.1
SND1Q7KZF4 DGUOK-207ENST00000493055 593 ntTSL 25.81□□□□□ -1.482e-6■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-214ENST00000489869 842 ntTSL 25.56□□□□□ -1.522e-6■□□□□ 8.1
SND1Q7KZF4 G3BP2-215ENST00000510902 338 ntTSL 35.53□□□□□ -1.522e-6■□□□□ 8.1
SND1Q7KZF4 IMPDH2-209ENST00000484872 643 ntTSL 25.46□□□□□ -1.542e-6■□□□□ 8.1
SND1Q7KZF4 RPL5-204ENST00000470843 694 ntTSL 35.36□□□□□ -1.552e-15■□□□□ 8.1
SND1Q7KZF4 RPS17-208ENST00000561068 522 ntTSL 34.88□□□□□ -1.634e-32■□□□□ 8.1
SND1Q7KZF4 RPS17-202ENST00000558397 583 ntTSL 34.82□□□□□ -1.644e-32■□□□□ 8.1
SND1Q7KZF4 XPO1-219ENST00000481073 3706 ntTSL 24.82□□□□□ -1.642e-9■□□□□ 8.1
SND1Q7KZF4 RPS4XP22-201ENST00000480755 780 ntBASIC4.44□□□□□ -1.75e-7■□□□□ 8.1
SND1Q7KZF4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.742e-9■□□□□ 8.1
SND1Q7KZF4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.334e-14■□□□□ 8.1
SND1Q7KZF4 SEMA3B-205ENST00000434030 1011 ntTSL 322.82■■□□□ 1.246e-7■□□□□ 8
SND1Q7KZF4 SEMA3B-206ENST00000439487 594 ntTSL 320.19■□□□□ 0.826e-7■□□□□ 8
SND1Q7KZF4 PNPLA6-210ENST00000595176 999 ntTSL 319.05■□□□□ 0.646e-7■□□□□ 8
SND1Q7KZF4 PNPLA6-217ENST00000599311 1005 ntTSL 517.97■□□□□ 0.476e-7■□□□□ 8
SND1Q7KZF4 NOP56-220ENST00000616692 2662 ntTSL 1 (best)16.47■□□□□ 0.236e-7■□□□□ 8
SND1Q7KZF4 NOP56-219ENST00000612233 2980 nt14.87□□□□□ -0.036e-7■□□□□ 8
SND1Q7KZF4 NOP56-216ENST00000492135 1143 ntTSL 1 (best)14.74□□□□□ -0.056e-7■□□□□ 8
SND1Q7KZF4 NOP56-202ENST00000415272 1628 ntTSL 510.5□□□□□ -0.736e-7■□□□□ 8
SND1Q7KZF4 NOP56-207ENST00000467196 1320 ntTSL 58.86□□□□□ -0.996e-7■□□□□ 8
SND1Q7KZF4 NOP56-214ENST00000484998 998 ntTSL 58.14□□□□□ -1.116e-7■□□□□ 8
SND1Q7KZF4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.222e-9■□□□□ 8
SND1Q7KZF4 GORASP2-202ENST00000442798 1976 ntTSL 215.22■□□□□ 0.032e-9■□□□□ 8
SND1Q7KZF4 GORASP2-207ENST00000486498 2096 ntTSL 213.76□□□□□ -0.212e-9■□□□□ 8
Retrieved 67 of 13,567 protein–RNA pairs in 218.9 ms