RNA–Protein interactions for RNA: ENST00000465122.5

PDCD6IP-208, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-208ENST00000465122 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
PDCD6IP-208ENST00000465122 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
PDCD6IP-208ENST00000465122 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
PDCD6IP-208ENST00000465122 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
PDCD6IP-208ENST00000465122 FOXD1Q16676 465 aa21.63■■□□□ 1.05
PDCD6IP-208ENST00000465122 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
PDCD6IP-208ENST00000465122 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
PDCD6IP-208ENST00000465122 ADRA2BP18089 450 aa20.35■□□□□ 0.85
PDCD6IP-208ENST00000465122 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
PDCD6IP-208ENST00000465122 MSH5O43196 834 aa20.27■□□□□ 0.84
PDCD6IP-208ENST00000465122 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PDCD6IP-208ENST00000465122 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
PDCD6IP-208ENST00000465122 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
PDCD6IP-208ENST00000465122 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
PDCD6IP-208ENST00000465122 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
PDCD6IP-208ENST00000465122 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
PDCD6IP-208ENST00000465122 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
PDCD6IP-208ENST00000465122 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
PDCD6IP-208ENST00000465122 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
PDCD6IP-208ENST00000465122 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
PDCD6IP-208ENST00000465122 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
PDCD6IP-208ENST00000465122 KCNA4P22459 653 aa17.36■□□□□ 0.37
PDCD6IP-208ENST00000465122 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
PDCD6IP-208ENST00000465122 RNF39Q9H2S5 420 aa17.22■□□□□ 0.35
PDCD6IP-208ENST00000465122 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
PDCD6IP-208ENST00000465122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.347e-7■□□□□ 9.4
PDCD6IP-208ENST00000465122 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
PDCD6IP-208ENST00000465122 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
PDCD6IP-208ENST00000465122 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
PDCD6IP-208ENST00000465122 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
PDCD6IP-208ENST00000465122 CAPN15O75808 1086 aa16.49■□□□□ 0.23
PDCD6IP-208ENST00000465122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PDCD6IP-208ENST00000465122 APLP2Q06481 763 aa16.46■□□□□ 0.23
PDCD6IP-208ENST00000465122 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PDCD6IP-208ENST00000465122 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
PDCD6IP-208ENST00000465122 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
PDCD6IP-208ENST00000465122 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
PDCD6IP-208ENST00000465122 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
PDCD6IP-208ENST00000465122 ZNF219Q9P2Y4 722 aaPredicted RBP16.23■□□□□ 0.19
PDCD6IP-208ENST00000465122 DSG3P32926 999 aa16.21■□□□□ 0.19
PDCD6IP-208ENST00000465122 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
PDCD6IP-208ENST00000465122 ABCB7O75027 752 aa16.07■□□□□ 0.16
PDCD6IP-208ENST00000465122 ZBTB22O15209 634 aa15.87■□□□□ 0.13
PDCD6IP-208ENST00000465122 POLA2Q14181 598 aa15.84■□□□□ 0.13
PDCD6IP-208ENST00000465122 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
PDCD6IP-208ENST00000465122 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
PDCD6IP-208ENST00000465122 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
PDCD6IP-208ENST00000465122 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
PDCD6IP-208ENST00000465122 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
PDCD6IP-208ENST00000465122 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
PDCD6IP-208ENST00000465122 FBLN2P98095 1184 aa15.33■□□□□ 0.04
PDCD6IP-208ENST00000465122 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
PDCD6IP-208ENST00000465122 POTEHQ6S545 545 aa15.24■□□□□ 0.03
PDCD6IP-208ENST00000465122 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
PDCD6IP-208ENST00000465122 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
PDCD6IP-208ENST00000465122 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
PDCD6IP-208ENST00000465122 SPDYE6P0CI01 402 aa15.07■□□□□ 0
PDCD6IP-208ENST00000465122 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
PDCD6IP-208ENST00000465122 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
PDCD6IP-208ENST00000465122 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
PDCD6IP-208ENST00000465122 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
PDCD6IP-208ENST00000465122 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
PDCD6IP-208ENST00000465122 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
PDCD6IP-208ENST00000465122 SSUH2Q9Y2M2 353 aa14.8□□□□□ -0.04
PDCD6IP-208ENST00000465122 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
PDCD6IP-208ENST00000465122 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
PDCD6IP-208ENST00000465122 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDCD6IP-208ENST00000465122 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDCD6IP-208ENST00000465122 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
PDCD6IP-208ENST00000465122 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
PDCD6IP-208ENST00000465122 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
PDCD6IP-208ENST00000465122 HAX1O00165 279 aa14.54□□□□□ -0.08
PDCD6IP-208ENST00000465122 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
PDCD6IP-208ENST00000465122 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
PDCD6IP-208ENST00000465122 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
PDCD6IP-208ENST00000465122 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
PDCD6IP-208ENST00000465122 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
PDCD6IP-208ENST00000465122 EVX2Q03828 476 aa14.18□□□□□ -0.14
PDCD6IP-208ENST00000465122 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
PDCD6IP-208ENST00000465122 CD44P16070 742 aaKnown RBP14.11□□□□□ -0.15
PDCD6IP-208ENST00000465122 PROM2Q8N271 834 aa14.09□□□□□ -0.15
PDCD6IP-208ENST00000465122 FKBP8Q14318 412 aa14.07□□□□□ -0.16
PDCD6IP-208ENST00000465122 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDCD6IP-208ENST00000465122 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
PDCD6IP-208ENST00000465122 PAK3O75914 559 aaPredicted RBP13.99□□□□□ -0.17
PDCD6IP-208ENST00000465122 GABBR2O75899 941 aa13.97□□□□□ -0.17
PDCD6IP-208ENST00000465122 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
PDCD6IP-208ENST00000465122 MIER1Q8N108 512 aa13.94□□□□□ -0.18
PDCD6IP-208ENST00000465122 CLCN6P51797 869 aa13.92□□□□□ -0.18
PDCD6IP-208ENST00000465122 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
PDCD6IP-208ENST00000465122 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
PDCD6IP-208ENST00000465122 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
PDCD6IP-208ENST00000465122 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
PDCD6IP-208ENST00000465122 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
PDCD6IP-208ENST00000465122 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
PDCD6IP-208ENST00000465122 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
PDCD6IP-208ENST00000465122 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
PDCD6IP-208ENST00000465122 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
PDCD6IP-208ENST00000465122 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
PDCD6IP-208ENST00000465122 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms