RNA–Protein interactions for RNA: ENST00000476566.1

ARPC3-206, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 2

Gene ARPC3, Length 362 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-206ENST00000476566 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
ARPC3-206ENST00000476566 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
ARPC3-206ENST00000476566 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
ARPC3-206ENST00000476566 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
ARPC3-206ENST00000476566 FOXD1Q16676 465 aa22.92■■□□□ 1.26
ARPC3-206ENST00000476566 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
ARPC3-206ENST00000476566 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
ARPC3-206ENST00000476566 ADRA2BP18089 450 aa21.56■■□□□ 1.04
ARPC3-206ENST00000476566 PIAS4Q8N2W9 510 aaPredicted RBP21.48■■□□□ 1.03
ARPC3-206ENST00000476566 MSH5O43196 834 aa21.35■■□□□ 1.01
ARPC3-206ENST00000476566 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
ARPC3-206ENST00000476566 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
ARPC3-206ENST00000476566 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
ARPC3-206ENST00000476566 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
ARPC3-206ENST00000476566 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
ARPC3-206ENST00000476566 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
ARPC3-206ENST00000476566 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
ARPC3-206ENST00000476566 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
ARPC3-206ENST00000476566 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
ARPC3-206ENST00000476566 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
ARPC3-206ENST00000476566 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
ARPC3-206ENST00000476566 KCNA4P22459 653 aa18.36■□□□□ 0.53
ARPC3-206ENST00000476566 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
ARPC3-206ENST00000476566 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
ARPC3-206ENST00000476566 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
ARPC3-206ENST00000476566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■□□□□ 11.3
ARPC3-206ENST00000476566 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
ARPC3-206ENST00000476566 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
ARPC3-206ENST00000476566 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
ARPC3-206ENST00000476566 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
ARPC3-206ENST00000476566 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
ARPC3-206ENST00000476566 CAPN15O75808 1086 aa17.33■□□□□ 0.36
ARPC3-206ENST00000476566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
ARPC3-206ENST00000476566 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
ARPC3-206ENST00000476566 DSG3P32926 999 aa17.16■□□□□ 0.34
ARPC3-206ENST00000476566 APLP2Q06481 763 aa17.16■□□□□ 0.34
ARPC3-206ENST00000476566 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
ARPC3-206ENST00000476566 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
ARPC3-206ENST00000476566 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
ARPC3-206ENST00000476566 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
ARPC3-206ENST00000476566 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
ARPC3-206ENST00000476566 ABCB7O75027 752 aa16.97■□□□□ 0.31
ARPC3-206ENST00000476566 ZBTB22O15209 634 aa16.9■□□□□ 0.3
ARPC3-206ENST00000476566 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
ARPC3-206ENST00000476566 POLA2Q14181 598 aa16.67■□□□□ 0.26
ARPC3-206ENST00000476566 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
ARPC3-206ENST00000476566 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
ARPC3-206ENST00000476566 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
ARPC3-206ENST00000476566 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
ARPC3-206ENST00000476566 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
ARPC3-206ENST00000476566 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ARPC3-206ENST00000476566 POTEHQ6S545 545 aa16.11■□□□□ 0.17
ARPC3-206ENST00000476566 FBLN2P98095 1184 aa16.04■□□□□ 0.16
ARPC3-206ENST00000476566 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
ARPC3-206ENST00000476566 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
ARPC3-206ENST00000476566 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
ARPC3-206ENST00000476566 REM2Q8IYK8 340 aaPredicted RBP15.89■□□□□ 0.13
ARPC3-206ENST00000476566 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
ARPC3-206ENST00000476566 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
ARPC3-206ENST00000476566 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
ARPC3-206ENST00000476566 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
ARPC3-206ENST00000476566 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
ARPC3-206ENST00000476566 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
ARPC3-206ENST00000476566 PIP4P2Q8N4L2 257 aa15.61■□□□□ 0.09
ARPC3-206ENST00000476566 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
ARPC3-206ENST00000476566 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
ARPC3-206ENST00000476566 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
ARPC3-206ENST00000476566 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
ARPC3-206ENST00000476566 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
ARPC3-206ENST00000476566 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
ARPC3-206ENST00000476566 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
ARPC3-206ENST00000476566 HAX1O00165 279 aa15.26■□□□□ 0.03
ARPC3-206ENST00000476566 CHADLQ6NUI6 762 aa15.21■□□□□ 0.03
ARPC3-206ENST00000476566 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
ARPC3-206ENST00000476566 EVX2Q03828 476 aa15.11■□□□□ 0.01
ARPC3-206ENST00000476566 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
ARPC3-206ENST00000476566 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
ARPC3-206ENST00000476566 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
ARPC3-206ENST00000476566 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
ARPC3-206ENST00000476566 PROM2Q8N271 834 aa14.95□□□□□ -0.02
ARPC3-206ENST00000476566 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
ARPC3-206ENST00000476566 FKBP8Q14318 412 aa14.77□□□□□ -0.05
ARPC3-206ENST00000476566 GABBR2O75899 941 aa14.76□□□□□ -0.05
ARPC3-206ENST00000476566 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
ARPC3-206ENST00000476566 ZRANB1Q9UGI0 708 aa14.68□□□□□ -0.06
ARPC3-206ENST00000476566 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
ARPC3-206ENST00000476566 ZNF579Q8NAF0 562 aaKnown RBP14.62□□□□□ -0.07
ARPC3-206ENST00000476566 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
ARPC3-206ENST00000476566 MIER1Q8N108 512 aa14.57□□□□□ -0.08
ARPC3-206ENST00000476566 CLCN6P51797 869 aa14.53□□□□□ -0.08
ARPC3-206ENST00000476566 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
ARPC3-206ENST00000476566 PHF12Q96QT6 1004 aa14.51□□□□□ -0.09
ARPC3-206ENST00000476566 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
ARPC3-206ENST00000476566 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
ARPC3-206ENST00000476566 GALR2O43603 387 aaPredicted RBP14.45□□□□□ -0.1
ARPC3-206ENST00000476566 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
ARPC3-206ENST00000476566 DCBLD2Q96PD2 775 aa14.4□□□□□ -0.1
ARPC3-206ENST00000476566 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
ARPC3-206ENST00000476566 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
ARPC3-206ENST00000476566 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms