RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
ARPC3-208ENST00000548878 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
ARPC3-208ENST00000548878 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
ARPC3-208ENST00000548878 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
ARPC3-208ENST00000548878 FOXD1Q16676 465 aa23.1■■□□□ 1.29
ARPC3-208ENST00000548878 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
ARPC3-208ENST00000548878 MSH5O43196 834 aa21.67■■□□□ 1.06
ARPC3-208ENST00000548878 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
ARPC3-208ENST00000548878 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
ARPC3-208ENST00000548878 ADRA2BP18089 450 aa21.56■■□□□ 1.04
ARPC3-208ENST00000548878 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
ARPC3-208ENST00000548878 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
ARPC3-208ENST00000548878 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
ARPC3-208ENST00000548878 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
ARPC3-208ENST00000548878 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
ARPC3-208ENST00000548878 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
ARPC3-208ENST00000548878 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
ARPC3-208ENST00000548878 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
ARPC3-208ENST00000548878 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
ARPC3-208ENST00000548878 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
ARPC3-208ENST00000548878 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
ARPC3-208ENST00000548878 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
ARPC3-208ENST00000548878 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
ARPC3-208ENST00000548878 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
ARPC3-208ENST00000548878 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
ARPC3-208ENST00000548878 KCNA4P22459 653 aa18.11■□□□□ 0.49
ARPC3-208ENST00000548878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.497e-7■□□□□ 11
ARPC3-208ENST00000548878 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
ARPC3-208ENST00000548878 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
ARPC3-208ENST00000548878 CAPN15O75808 1086 aa17.4■□□□□ 0.38
ARPC3-208ENST00000548878 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
ARPC3-208ENST00000548878 APLP2Q06481 763 aa17.36■□□□□ 0.37
ARPC3-208ENST00000548878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
ARPC3-208ENST00000548878 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
ARPC3-208ENST00000548878 DSG3P32926 999 aa17.3■□□□□ 0.36
ARPC3-208ENST00000548878 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
ARPC3-208ENST00000548878 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
ARPC3-208ENST00000548878 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
ARPC3-208ENST00000548878 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
ARPC3-208ENST00000548878 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
ARPC3-208ENST00000548878 ABCB7O75027 752 aa16.95■□□□□ 0.3
ARPC3-208ENST00000548878 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
ARPC3-208ENST00000548878 POLA2Q14181 598 aa16.7■□□□□ 0.26
ARPC3-208ENST00000548878 ZBTB22O15209 634 aa16.63■□□□□ 0.25
ARPC3-208ENST00000548878 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
ARPC3-208ENST00000548878 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
ARPC3-208ENST00000548878 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
ARPC3-208ENST00000548878 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
ARPC3-208ENST00000548878 POTEHQ6S545 545 aa16.45■□□□□ 0.22
ARPC3-208ENST00000548878 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
ARPC3-208ENST00000548878 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
ARPC3-208ENST00000548878 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
ARPC3-208ENST00000548878 FBLN2P98095 1184 aa16.05■□□□□ 0.16
ARPC3-208ENST00000548878 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
ARPC3-208ENST00000548878 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
ARPC3-208ENST00000548878 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
ARPC3-208ENST00000548878 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
ARPC3-208ENST00000548878 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
ARPC3-208ENST00000548878 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
ARPC3-208ENST00000548878 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
ARPC3-208ENST00000548878 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
ARPC3-208ENST00000548878 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
ARPC3-208ENST00000548878 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
ARPC3-208ENST00000548878 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
ARPC3-208ENST00000548878 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
ARPC3-208ENST00000548878 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
ARPC3-208ENST00000548878 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
ARPC3-208ENST00000548878 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
ARPC3-208ENST00000548878 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.07
ARPC3-208ENST00000548878 HAX1O00165 279 aa15.44■□□□□ 0.06
ARPC3-208ENST00000548878 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
ARPC3-208ENST00000548878 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
ARPC3-208ENST00000548878 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
ARPC3-208ENST00000548878 EVX2Q03828 476 aa15.19■□□□□ 0.02
ARPC3-208ENST00000548878 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
ARPC3-208ENST00000548878 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
ARPC3-208ENST00000548878 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
ARPC3-208ENST00000548878 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ -0
ARPC3-208ENST00000548878 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
ARPC3-208ENST00000548878 GABBR2O75899 941 aa14.92□□□□□ -0.02
ARPC3-208ENST00000548878 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
ARPC3-208ENST00000548878 PROM2Q8N271 834 aa14.87□□□□□ -0.03
ARPC3-208ENST00000548878 CLCN6P51797 869 aa14.85□□□□□ -0.03
ARPC3-208ENST00000548878 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
ARPC3-208ENST00000548878 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
ARPC3-208ENST00000548878 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
ARPC3-208ENST00000548878 MNX1P50219 401 aaPredicted RBP14.69□□□□□ -0.06
ARPC3-208ENST00000548878 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
ARPC3-208ENST00000548878 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
ARPC3-208ENST00000548878 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
ARPC3-208ENST00000548878 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
ARPC3-208ENST00000548878 LHX8Q68G74 356 aa14.5□□□□□ -0.09
ARPC3-208ENST00000548878 MIER1Q8N108 512 aa14.49□□□□□ -0.09
ARPC3-208ENST00000548878 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
ARPC3-208ENST00000548878 GALR2O43603 387 aaPredicted RBP14.47□□□□□ -0.09
ARPC3-208ENST00000548878 FKBP8Q14318 412 aa14.46□□□□□ -0.09
ARPC3-208ENST00000548878 PLCD3Q8N3E9 789 aa14.38□□□□□ -0.11
ARPC3-208ENST00000548878 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
ARPC3-208ENST00000548878 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
ARPC3-208ENST00000548878 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms