Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 FER1L4-210ENST00000615531 5998 ntBASIC15.49■□□□□ 0.07
HIST2H3AQ71DI3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AC116407.4-201ENST00000623319 1061 ntBASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AC124864.1-201ENST00000623408 392 ntBASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AC125634.1-201ENST00000438758 1403 ntBASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 AC010460.3-201ENST00000511359 1579 ntBASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HIST2H3AQ71DI3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 AL138831.2-201ENST00000606564 490 ntBASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
HIST2H3AQ71DI3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST2H3AQ71DI3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms