Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 LTB4R2-202ENST00000528054 3092 ntBASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST2H2AA3Q6FI13 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AL138688.1-201ENST00000624851 1594 ntBASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AC246785.2-201ENST00000432512 513 ntBASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 REXO1L11P-201ENST00000620964 1927 ntBASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 FZD10-202ENST00000539839 3282 ntBASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST2H2AA3Q6FI13 AC016734.2-201ENST00000624325 1377 ntBASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 COX5BP2-201ENST00000392354 334 ntBASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 TSSC2-201ENST00000450217 709 ntBASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HIST2H2AA3Q6FI13 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HIST2H2AA3Q6FI13 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST2H2AA3Q6FI13 KRT18P1-202ENST00000452408 1331 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms