Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.03□□□□□ -0.16
FAM78BQ5VT40 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
FAM78BQ5VT40 HOXB1-202ENST00000577092 1414 ntBASIC14.02□□□□□ -0.16
FAM78BQ5VT40 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 KRT18P23-201ENST00000435622 1283 ntBASIC14.02□□□□□ -0.17
FAM78BQ5VT40 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 AC233702.5-201ENST00000584107 538 ntBASIC14.02□□□□□ -0.17
FAM78BQ5VT40 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FAM78BQ5VT40 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 KRT8P7-201ENST00000533003 1432 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC096733.2-201ENST00000609937 1394 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AL355355.2-201ENST00000442321 338 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 NUDT16P1-203ENST00000513809 620 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms