Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC011495.1-201ENST00000498085 584 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC109635.5-201ENST00000533593 962 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC015936.2-201ENST00000593177 259 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC010319.3-201ENST00000597028 470 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 AC104784.1-201ENST00000473096 294 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 IGHV3-62-201ENST00000520057 340 ntBASIC9.49□□□□□ -0.89
UBR4Q5T4S7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC9.49□□□□□ -0.89
UBR4Q5T4S7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AL024508.2-201ENST00000607749 1894 ntBASIC9.48□□□□□ -0.89
UBR4Q5T4S7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AL662890.1-201ENST00000396818 632 ntBASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SPDYE19P-201ENST00000338590 713 ntBASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 RARRES2P8-201ENST00000566335 367 ntBASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 CD81-207ENST00000481687 890 ntTSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC9.48□□□□□ -0.89
UBR4Q5T4S7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC053503.3-201ENST00000448375 114 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 HLA-V-204ENST00000476601 1289 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 BTBD7P1-201ENST00000447253 1453 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms