Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 AKR1C7P-201ENST00000305623 895 ntBASIC18.8■□□□□ 0.6
MCCD1P59942 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.8■□□□□ 0.6
MCCD1P59942 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.8■□□□□ 0.6
MCCD1P59942 AC124947.2-201ENST00000547118 1133 ntBASIC18.8■□□□□ 0.6
MCCD1P59942 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.8■□□□□ 0.6
MCCD1P59942 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.8■□□□□ 0.6
MCCD1P59942 AC138894.3-201ENST00000603787 634 ntBASIC18.8■□□□□ 0.6
MCCD1P59942 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MCCD1P59942 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.79■□□□□ 0.6
MCCD1P59942 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 FGFR3P6-201ENST00000457012 610 ntBASIC18.79■□□□□ 0.6
MCCD1P59942 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.79■□□□□ 0.6
MCCD1P59942 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.79■□□□□ 0.6
MCCD1P59942 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.79■□□□□ 0.6
MCCD1P59942 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MCCD1P59942 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MCCD1P59942 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MCCD1P59942 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.78■□□□□ 0.6
MCCD1P59942 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MCCD1P59942 EGFEM1P-202ENST00000431685 1563 ntBASIC18.78■□□□□ 0.6
MCCD1P59942 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.78■□□□□ 0.6
MCCD1P59942 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
MCCD1P59942 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.78■□□□□ 0.6
MCCD1P59942 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MCCD1P59942 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
MCCD1P59942 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 AC091304.2-201ENST00000564639 760 ntBASIC18.78■□□□□ 0.6
MCCD1P59942 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.78■□□□□ 0.6
MCCD1P59942 CLEC4GP1-201ENST00000596555 870 ntBASIC18.78■□□□□ 0.6
MCCD1P59942 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.78■□□□□ 0.6
MCCD1P59942 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MCCD1P59942 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.78■□□□□ 0.6
MCCD1P59942 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MCCD1P59942 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.77■□□□□ 0.6
MCCD1P59942 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.77■□□□□ 0.6
MCCD1P59942 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
MCCD1P59942 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MCCD1P59942 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.77■□□□□ 0.6
MCCD1P59942 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MCCD1P59942 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms