Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 AL513477.1-201ENST00000602865 2407 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.16■□□□□ 0.02
AP3S2P59780 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP3S2P59780 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 AC022188.1-201ENST00000620960 1664 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP3S2P59780 AC005915.1-201ENST00000624912 2018 ntBASIC15.16■□□□□ 0.02
AP3S2P59780 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 AC036111.1-201ENST00000533973 1582 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 CYP2T1P-202ENST00000641596 2535 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP3S2P59780 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.15■□□□□ 0.02
AP3S2P59780 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP3S2P59780 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.15■□□□□ 0.02
AP3S2P59780 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 MIR3180-5-201ENST00000583743 153 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 AC008622.2-201ENST00000617006 1229 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 KRT8P7-201ENST00000533003 1432 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.15■□□□□ 0.02
AP3S2P59780 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
AP3S2P59780 LINC02199-201ENST00000506655 2702 ntBASIC15.15■□□□□ 0.02
AP3S2P59780 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP3S2P59780 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 AL024508.2-201ENST00000607749 1894 ntBASIC15.14■□□□□ 0.01
AP3S2P59780 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP3S2P59780 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.14■□□□□ 0.01
AP3S2P59780 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 KRT16P5-201ENST00000455284 522 ntBASIC15.14■□□□□ 0.01
AP3S2P59780 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 AC067930.6-201ENST00000623257 4947 ntBASIC15.14■□□□□ 0.01
AP3S2P59780 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
AP3S2P59780 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 AL513523.2-202ENST00000427283 2040 ntBASIC15.14■□□□□ 0.01
AP3S2P59780 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms