Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PER3P56645 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 AL163051.1-201ENST00000569214 1512 ntBASIC16.34■□□□□ 0.21
PER3P56645 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.34■□□□□ 0.21
PER3P56645 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PER3P56645 AL031598.1-201ENST00000561511 1773 ntBASIC16.33■□□□□ 0.21
PER3P56645 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PER3P56645 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PER3P56645 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.33■□□□□ 0.21
PER3P56645 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.33■□□□□ 0.2
PER3P56645 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.33■□□□□ 0.2
PER3P56645 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.33■□□□□ 0.2
PER3P56645 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
PER3P56645 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.33■□□□□ 0.2
PER3P56645 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
PER3P56645 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.33■□□□□ 0.2
PER3P56645 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.33■□□□□ 0.2
PER3P56645 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PER3P56645 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.33■□□□□ 0.2
PER3P56645 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PER3P56645 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PER3P56645 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PER3P56645 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.33■□□□□ 0.2
PER3P56645 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PER3P56645 AC046158.3-201ENST00000624947 2558 ntBASIC16.33■□□□□ 0.2
PER3P56645 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.32■□□□□ 0.2
PER3P56645 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.32■□□□□ 0.2
PER3P56645 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PER3P56645 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.32■□□□□ 0.2
PER3P56645 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.32■□□□□ 0.2
PER3P56645 RPL13AP23-201ENST00000480739 586 ntBASIC16.32■□□□□ 0.2
PER3P56645 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.32■□□□□ 0.2
PER3P56645 AC096582.2-201ENST00000510860 516 ntBASIC16.32■□□□□ 0.2
PER3P56645 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.32■□□□□ 0.2
PER3P56645 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.32■□□□□ 0.2
PER3P56645 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.32■□□□□ 0.2
PER3P56645 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.32■□□□□ 0.2
PER3P56645 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 MIR5100-201ENST00000579544 119 ntBASIC16.32■□□□□ 0.2
PER3P56645 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 AC114341.1-201ENST00000618070 349 ntBASIC16.32■□□□□ 0.2
PER3P56645 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.32■□□□□ 0.2
PER3P56645 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
PER3P56645 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.32■□□□□ 0.2
PER3P56645 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PER3P56645 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PER3P56645 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
PER3P56645 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PER3P56645 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms