Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.94■□□□□ 0.3
EPHA4P54764 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHA4P54764 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHA4P54764 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHA4P54764 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHA4P54764 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHA4P54764 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 AP002414.3-201ENST00000589352 1468 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 NOC2LP1-202ENST00000452600 2235 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHA4P54764 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHA4P54764 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 AC005104.2-201ENST00000427818 678 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHA4P54764 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 STK19B-204ENST00000512515 211 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 RNA5SP415-201ENST00000517246 115 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHA4P54764 AC027601.4-201ENST00000611259 610 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHA4P54764 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHA4P54764 AC004817.3-201ENST00000602957 2129 ntBASIC16.93■□□□□ 0.3
EPHA4P54764 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHA4P54764 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
EPHA4P54764 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.92■□□□□ 0.3
EPHA4P54764 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 AC073621.1-201ENST00000392730 636 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 AC136632.2-201ENST00000512891 861 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 AC034105.1-201ENST00000563488 319 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA4P54764 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.92■□□□□ 0.3
EPHA4P54764 TERC-201ENST00000602385 541 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 FAM197Y3-203ENST00000618346 717 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 AC004706.3-202ENST00000621574 984 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 AC005593.1-201ENST00000624894 515 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 PMS2P7-201ENST00000506558 1336 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 AC148477.5-201ENST00000625164 1645 ntBASIC16.92■□□□□ 0.3
EPHA4P54764 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA4P54764 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA4P54764 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHA4P54764 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
EPHA4P54764 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA4P54764 AC138028.4-201ENST00000564984 1845 ntBASIC16.91■□□□□ 0.3
EPHA4P54764 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHA4P54764 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHA4P54764 AC009336.1-201ENST00000608941 1553 ntBASIC16.91■□□□□ 0.3
EPHA4P54764 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA4P54764 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA4P54764 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
EPHA4P54764 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.91■□□□□ 0.3
EPHA4P54764 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHA4P54764 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms