Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LIMK1P53667 AL035252.4-201ENST00000624174 288 ntBASIC17.37■□□□□ 0.37
LIMK1P53667 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.37■□□□□ 0.37
LIMK1P53667 AF228730.6-201ENST00000641497 218 ntBASIC17.37■□□□□ 0.37
LIMK1P53667 AC084121.3-201ENST00000641716 218 ntBASIC17.37■□□□□ 0.37
LIMK1P53667 AC105233.6-201ENST00000642093 218 ntBASIC17.37■□□□□ 0.37
LIMK1P53667 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK1P53667 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LIMK1P53667 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK1P53667 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.37■□□□□ 0.37
LIMK1P53667 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIMK1P53667 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
LIMK1P53667 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.36■□□□□ 0.37
LIMK1P53667 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.36■□□□□ 0.37
LIMK1P53667 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
LIMK1P53667 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.36■□□□□ 0.37
LIMK1P53667 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 AC005034.1-201ENST00000426657 489 ntBASIC17.36■□□□□ 0.37
LIMK1P53667 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.36■□□□□ 0.37
LIMK1P53667 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.36■□□□□ 0.37
LIMK1P53667 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 Z92544.3-201ENST00000624747 417 ntBASIC17.36■□□□□ 0.37
LIMK1P53667 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
LIMK1P53667 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
LIMK1P53667 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.36■□□□□ 0.37
LIMK1P53667 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LIMK1P53667 MTMR9LP-203ENST00000426597 1545 ntBASIC17.36■□□□□ 0.37
LIMK1P53667 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LIMK1P53667 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK1P53667 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK1P53667 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK1P53667 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.35■□□□□ 0.37
LIMK1P53667 IGHV3-65-201ENST00000523210 341 ntBASIC17.35■□□□□ 0.37
LIMK1P53667 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.35■□□□□ 0.37
LIMK1P53667 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LIMK1P53667 AC008667.4-201ENST00000607370 168 ntBASIC17.35■□□□□ 0.37
LIMK1P53667 AD001527.2-201ENST00000622994 785 ntBASIC17.35■□□□□ 0.37
LIMK1P53667 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.35■□□□□ 0.37
LIMK1P53667 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.35■□□□□ 0.37
LIMK1P53667 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.35■□□□□ 0.37
LIMK1P53667 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LIMK1P53667 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK1P53667 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK1P53667 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK1P53667 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LIMK1P53667 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms