Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GTF2A1P52655 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
GTF2A1P52655 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 HLA-G-202ENST00000376815 851 ntBASIC17.29■□□□□ 0.36
GTF2A1P52655 HLA-G-203ENST00000376818 1127 ntBASIC17.29■□□□□ 0.36
GTF2A1P52655 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.29■□□□□ 0.36
GTF2A1P52655 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2A1P52655 AC105020.6-201ENST00000621523 1217 ntBASIC17.29■□□□□ 0.36
GTF2A1P52655 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 PRAL-201ENST00000624952 3286 ntBASIC17.29■□□□□ 0.36
GTF2A1P52655 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2A1P52655 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2A1P52655 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2A1P52655 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GTF2A1P52655 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2A1P52655 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.28■□□□□ 0.36
GTF2A1P52655 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
GTF2A1P52655 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GTF2A1P52655 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 AL096828.2-201ENST00000567259 1965 ntBASIC17.28■□□□□ 0.36
GTF2A1P52655 AC026748.1-201ENST00000624349 3251 ntBASIC17.28■□□□□ 0.36
GTF2A1P52655 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 AC067930.6-201ENST00000623257 4947 ntBASIC17.28■□□□□ 0.36
GTF2A1P52655 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.28■□□□□ 0.36
GTF2A1P52655 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GTF2A1P52655 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GTF2A1P52655 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.28■□□□□ 0.36
GTF2A1P52655 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 AL499627.1-201ENST00000569373 2188 ntBASIC17.28■□□□□ 0.36
GTF2A1P52655 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GTF2A1P52655 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.28■□□□□ 0.36
GTF2A1P52655 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.27■□□□□ 0.36
GTF2A1P52655 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
GTF2A1P52655 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GTF2A1P52655 AC007322.4-201ENST00000509611 723 ntBASIC17.27■□□□□ 0.36
GTF2A1P52655 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GTF2A1P52655 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.27■□□□□ 0.36
GTF2A1P52655 MFSD11-216ENST00000590393 1141 ntBASIC17.27■□□□□ 0.36
GTF2A1P52655 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms