Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.31■□□□□ 0.68
CLCN3P51790 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.31■□□□□ 0.68
CLCN3P51790 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLCN3P51790 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 AC005593.1-201ENST00000624894 515 ntBASIC19.31■□□□□ 0.68
CLCN3P51790 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 NCF1C-201ENST00000438382 1427 ntBASIC19.31■□□□□ 0.68
CLCN3P51790 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.31■□□□□ 0.68
CLCN3P51790 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 AC005104.2-201ENST00000427818 678 ntBASIC19.3■□□□□ 0.68
CLCN3P51790 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.3■□□□□ 0.68
CLCN3P51790 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.3■□□□□ 0.68
CLCN3P51790 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCN3P51790 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCN3P51790 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCN3P51790 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 AC007967.2-201ENST00000432613 625 ntBASIC19.29■□□□□ 0.68
CLCN3P51790 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN3P51790 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCN3P51790 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 AC097637.2-201ENST00000624096 1997 ntBASIC19.29■□□□□ 0.68
CLCN3P51790 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN3P51790 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLCN3P51790 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN3P51790 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN3P51790 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN3P51790 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLCN3P51790 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN3P51790 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLCN3P51790 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms