Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC012313.1-201ENST00000593393 3059 ntBASIC19.05■□□□□ 0.64
PDE6CP51160 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.05■□□□□ 0.64
PDE6CP51160 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PDE6CP51160 AC246785.2-201ENST00000432512 513 ntBASIC19.05■□□□□ 0.64
PDE6CP51160 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.05■□□□□ 0.64
PDE6CP51160 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 AL592071.1-201ENST00000611956 408 ntBASIC19.05■□□□□ 0.64
PDE6CP51160 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PDE6CP51160 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDE6CP51160 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6CP51160 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PDE6CP51160 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6CP51160 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6CP51160 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDE6CP51160 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDE6CP51160 AC133963.1-201ENST00000504166 1679 ntBASIC19.05■□□□□ 0.64
PDE6CP51160 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6CP51160 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6CP51160 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.04■□□□□ 0.64
PDE6CP51160 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6CP51160 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.04■□□□□ 0.64
PDE6CP51160 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PDE6CP51160 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6CP51160 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.04■□□□□ 0.64
PDE6CP51160 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6CP51160 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PDE6CP51160 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDE6CP51160 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.03■□□□□ 0.64
PDE6CP51160 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 AC004870.1-201ENST00000315132 882 ntBASIC19.03■□□□□ 0.64
PDE6CP51160 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDE6CP51160 FAAHP1-202ENST00000446499 1238 ntBASIC19.03■□□□□ 0.64
PDE6CP51160 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.03■□□□□ 0.64
PDE6CP51160 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.03■□□□□ 0.64
PDE6CP51160 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDE6CP51160 AC124864.1-201ENST00000623408 392 ntBASIC19.03■□□□□ 0.64
PDE6CP51160 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.03■□□□□ 0.64
PDE6CP51160 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 AC233702.3-201ENST00000578656 1387 ntBASIC19.03■□□□□ 0.64
PDE6CP51160 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDE6CP51160 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6CP51160 LINC00304-203ENST00000565008 1864 ntBASIC19.03■□□□□ 0.64
PDE6CP51160 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDE6CP51160 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
PDE6CP51160 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
PDE6CP51160 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6CP51160 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6CP51160 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6CP51160 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PDE6CP51160 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 MTCL1P1-201ENST00000446207 792 ntBASIC19.02■□□□□ 0.64
PDE6CP51160 RN7SL606P-201ENST00000472779 293 ntBASIC19.02■□□□□ 0.64
PDE6CP51160 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.02■□□□□ 0.64
PDE6CP51160 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6CP51160 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6CP51160 AC011840.4-201ENST00000578471 627 ntBASIC19.02■□□□□ 0.64
PDE6CP51160 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.02■□□□□ 0.64
PDE6CP51160 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms