Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGCLP35914 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCLP35914 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HMGCLP35914 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCLP35914 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCLP35914 AC132938.5-201ENST00000624980 1813 ntBASIC17.52■□□□□ 0.4
HMGCLP35914 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCLP35914 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCLP35914 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCLP35914 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCLP35914 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCLP35914 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCLP35914 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCLP35914 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCLP35914 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCLP35914 AL732292.2-201ENST00000609649 430 ntBASIC17.52■□□□□ 0.4
HMGCLP35914 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLP35914 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCLP35914 HTR7P1-202ENST00000624664 4411 ntBASIC17.52■□□□□ 0.39
HMGCLP35914 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLP35914 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLP35914 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
HMGCLP35914 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLP35914 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 AC003669.1-201ENST00000334569 611 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
HMGCLP35914 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCLP35914 DUSP5P1-201ENST00000441325 1139 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCLP35914 AC106795.1-205ENST00000512851 1056 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCLP35914 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.51■□□□□ 0.39
HMGCLP35914 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLP35914 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCLP35914 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.51■□□□□ 0.39
HMGCLP35914 AP005117.1-201ENST00000584346 1413 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCLP35914 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLP35914 LINC01711-201ENST00000598340 967 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 AC073592.5-201ENST00000624854 528 ntBASIC17.51■□□□□ 0.39
HMGCLP35914 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLP35914 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLP35914 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLP35914 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCLP35914 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HMGCLP35914 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCLP35914 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLP35914 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.5■□□□□ 0.39
HMGCLP35914 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.5■□□□□ 0.39
HMGCLP35914 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLP35914 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCLP35914 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCLP35914 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HMGCLP35914 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLP35914 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLP35914 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
HMGCLP35914 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms