Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN1P35523 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN1P35523 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN1P35523 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CLCN1P35523 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.08■□□□□ 0.8
CLCN1P35523 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN1P35523 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLCN1P35523 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CLCN1P35523 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN1P35523 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 AC133963.1-201ENST00000504166 1679 ntBASIC20.07■□□□□ 0.8
CLCN1P35523 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.07■□□□□ 0.8
CLCN1P35523 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN1P35523 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLCN1P35523 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN1P35523 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN1P35523 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.07■□□□□ 0.8
CLCN1P35523 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN1P35523 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN1P35523 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN1P35523 RCC2P3-201ENST00000418112 1537 ntBASIC20.07■□□□□ 0.8
CLCN1P35523 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLCN1P35523 AL357033.4-201ENST00000617703 1807 ntBASIC20.06■□□□□ 0.8
CLCN1P35523 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCN1P35523 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CLCN1P35523 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 MIR718-201ENST00000390190 70 ntBASIC20.06■□□□□ 0.8
CLCN1P35523 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.06■□□□□ 0.8
CLCN1P35523 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CLCN1P35523 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.06■□□□□ 0.8
CLCN1P35523 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN1P35523 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CLCN1P35523 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLCN1P35523 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 AC092384.3-202ENST00000564646 2873 ntBASIC20.05■□□□□ 0.8
CLCN1P35523 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLCN1P35523 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLCN1P35523 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 CRYGFP-201ENST00000418459 633 ntBASIC20.05■□□□□ 0.8
CLCN1P35523 RBM17P1-201ENST00000453646 1190 ntBASIC20.05■□□□□ 0.8
CLCN1P35523 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN1P35523 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN1P35523 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN1P35523 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms