Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA3P32297 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA3P32297 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA3P32297 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA3P32297 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA3P32297 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA3P32297 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CHRNA3P32297 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA3P32297 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA3P32297 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA3P32297 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA3P32297 BX276092.5-203ENST00000456199 560 ntBASIC18.58■□□□□ 0.56
CHRNA3P32297 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA3P32297 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA3P32297 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA3P32297 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA3P32297 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
CHRNA3P32297 AL121672.3-201ENST00000608644 468 ntBASIC18.58■□□□□ 0.56
CHRNA3P32297 LINC01451-201ENST00000623792 534 ntBASIC18.58■□□□□ 0.56
CHRNA3P32297 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA3P32297 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA3P32297 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHRNA3P32297 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA3P32297 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA3P32297 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA3P32297 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA3P32297 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA3P32297 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHRNA3P32297 KRT18P48-201ENST00000434763 852 ntBASIC18.57■□□□□ 0.56
CHRNA3P32297 AP003733.1-201ENST00000491725 852 ntBASIC18.57■□□□□ 0.56
CHRNA3P32297 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA3P32297 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.57■□□□□ 0.56
CHRNA3P32297 RNF126P1-202ENST00000569893 925 ntBASIC18.57■□□□□ 0.56
CHRNA3P32297 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 AC011676.5-201ENST00000624864 2660 ntBASIC18.57■□□□□ 0.56
CHRNA3P32297 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA3P32297 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA3P32297 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA3P32297 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 AC016734.2-201ENST00000624325 1377 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHRNA3P32297 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNA3P32297 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 TSPY22P-201ENST00000427496 604 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 ATP5G2P1-201ENST00000433580 426 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 HCG4P8-203ENST00000443049 980 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
CHRNA3P32297 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNA3P32297 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNA3P32297 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 KRT18P56-201ENST00000507275 550 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.56■□□□□ 0.56
CHRNA3P32297 KRT8P26-201ENST00000534154 1276 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 AC024563.2-201ENST00000603282 481 ntBASIC18.56■□□□□ 0.56
CHRNA3P32297 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms