Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF1P30408 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF1P30408 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TM4SF1P30408 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TM4SF1P30408 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF1P30408 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TM4SF1P30408 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF1P30408 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TM4SF1P30408 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.7■■□□□ 1.06
TM4SF1P30408 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.7■■□□□ 1.06
TM4SF1P30408 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.7■■□□□ 1.06
TM4SF1P30408 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF1P30408 AC243562.1-201ENST00000560672 389 ntBASIC21.7■■□□□ 1.06
TM4SF1P30408 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.7■■□□□ 1.06
TM4SF1P30408 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.7■■□□□ 1.06
TM4SF1P30408 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF1P30408 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF1P30408 PKD1P6-201ENST00000343738 4769 ntBASIC21.7■■□□□ 1.06
TM4SF1P30408 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TM4SF1P30408 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.69■■□□□ 1.06
TM4SF1P30408 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TM4SF1P30408 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TM4SF1P30408 GPS2P2-201ENST00000430745 888 ntBASIC21.69■■□□□ 1.06
TM4SF1P30408 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.69■■□□□ 1.06
TM4SF1P30408 AC005237.2-201ENST00000434368 219 ntBASIC21.69■■□□□ 1.06
TM4SF1P30408 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.69■■□□□ 1.06
TM4SF1P30408 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.69■■□□□ 1.06
TM4SF1P30408 INGX-202ENST00000489074 768 ntBASIC21.69■■□□□ 1.06
TM4SF1P30408 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.69■■□□□ 1.06
TM4SF1P30408 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.69■■□□□ 1.06
TM4SF1P30408 AL035252.4-201ENST00000624174 288 ntBASIC21.69■■□□□ 1.06
TM4SF1P30408 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.69■■□□□ 1.06
TM4SF1P30408 AC129492.6-201ENST00000611383 1305 ntBASIC21.69■■□□□ 1.06
TM4SF1P30408 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TM4SF1P30408 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF1P30408 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.69■■□□□ 1.06
TM4SF1P30408 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 AL592309.1-201ENST00000443127 649 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.68■■□□□ 1.06
TM4SF1P30408 SPDYE11-202ENST00000450699 704 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 AC079140.1-201ENST00000508039 487 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.68■■□□□ 1.06
TM4SF1P30408 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.68■■□□□ 1.06
TM4SF1P30408 SPDYE9P-201ENST00000570642 692 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 RN7SL204P-201ENST00000582831 262 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.68■■□□□ 1.06
TM4SF1P30408 SPDYE10P-202ENST00000612005 668 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 SPDYE8P-202ENST00000612377 668 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 AC063926.2-201ENST00000623766 1308 ntBASIC21.68■■□□□ 1.06
TM4SF1P30408 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.68■■□□□ 1.06
TM4SF1P30408 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF1P30408 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF1P30408 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms