Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VARSP26640 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VARSP26640 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.36■□□□□ 0.37
VARSP26640 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARSP26640 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
VARSP26640 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 IGHGP-201ENST00000390555 1178 ntBASIC17.36■□□□□ 0.37
VARSP26640 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.36■□□□□ 0.37
VARSP26640 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VARSP26640 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.36■□□□□ 0.37
VARSP26640 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.36■□□□□ 0.37
VARSP26640 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.36■□□□□ 0.37
VARSP26640 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
VARSP26640 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VARSP26640 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VARSP26640 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VARSP26640 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VARSP26640 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.35■□□□□ 0.37
VARSP26640 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.35■□□□□ 0.37
VARSP26640 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.35■□□□□ 0.37
VARSP26640 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.35■□□□□ 0.37
VARSP26640 RNF126P1-202ENST00000569893 925 ntBASIC17.35■□□□□ 0.37
VARSP26640 MIR3652-201ENST00000579335 131 ntBASIC17.35■□□□□ 0.37
VARSP26640 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
VARSP26640 AC005332.3-201ENST00000589904 676 ntBASIC17.35■□□□□ 0.37
VARSP26640 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.35■□□□□ 0.37
VARSP26640 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.35■□□□□ 0.37
VARSP26640 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.35■□□□□ 0.37
VARSP26640 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
VARSP26640 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARSP26640 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.35■□□□□ 0.37
VARSP26640 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 OR6D1P-202ENST00000641007 5290 ntBASIC17.34■□□□□ 0.37
VARSP26640 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
VARSP26640 FAAHP1-202ENST00000446499 1238 ntBASIC17.34■□□□□ 0.37
VARSP26640 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.34■□□□□ 0.37
VARSP26640 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VARSP26640 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VARSP26640 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARSP26640 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VARSP26640 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.33■□□□□ 0.37
VARSP26640 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.33■□□□□ 0.37
VARSP26640 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
VARSP26640 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VARSP26640 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARSP26640 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
VARSP26640 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms