Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP11P24347 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MMP11P24347 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP11P24347 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP11P24347 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP11P24347 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 BCL2-203ENST00000589955 5011 ntBASIC16.73■□□□□ 0.27
MMP11P24347 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
MMP11P24347 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP11P24347 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 AC079776.4-201ENST00000511039 504 ntBASIC16.73■□□□□ 0.27
MMP11P24347 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.73■□□□□ 0.27
MMP11P24347 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.73■□□□□ 0.27
MMP11P24347 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 AL773604.1-201ENST00000617417 272 ntBASIC16.73■□□□□ 0.27
MMP11P24347 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP11P24347 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP11P24347 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP11P24347 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP11P24347 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
MMP11P24347 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MMP11P24347 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MMP11P24347 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
MMP11P24347 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP11P24347 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 KRT18P67-201ENST00000432816 1264 ntBASIC16.72■□□□□ 0.27
MMP11P24347 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP11P24347 AF186996.4-201ENST00000467186 377 ntBASIC16.72■□□□□ 0.27
MMP11P24347 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.72■□□□□ 0.27
MMP11P24347 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.72■□□□□ 0.27
MMP11P24347 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP11P24347 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 AC012317.2-201ENST00000623305 2251 ntBASIC16.72■□□□□ 0.27
MMP11P24347 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP11P24347 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
MMP11P24347 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.72■□□□□ 0.27
MMP11P24347 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MMP11P24347 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MMP11P24347 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MMP11P24347 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MMP11P24347 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.71■□□□□ 0.27
MMP11P24347 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.71■□□□□ 0.27
MMP11P24347 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.71■□□□□ 0.27
MMP11P24347 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.71■□□□□ 0.27
MMP11P24347 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms