Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.79■□□□□ 0.44
HLA-DPA1P20036 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 NFIC-211ENST00000641145 8399 ntBASIC17.79■□□□□ 0.44
HLA-DPA1P20036 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPA1P20036 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 AC092329.2-201ENST00000598402 547 ntBASIC17.78■□□□□ 0.44
HLA-DPA1P20036 LETM1P2-201ENST00000597330 2178 ntBASIC17.78■□□□□ 0.44
HLA-DPA1P20036 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPA1P20036 NSUN5P1-202ENST00000421140 1535 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 NSUN5P2-203ENST00000457352 1529 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 IGHV3-47-201ENST00000425060 335 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC103564.2-201ENST00000432853 1299 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 MINOS1P3-201ENST00000457048 203 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms