Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 UBE2SP1-201ENST00000450587 669 ntBASIC17.7■□□□□ 0.42
KRT4P19013 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT4P19013 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT4P19013 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KRT4P19013 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT4P19013 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT4P19013 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT4P19013 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 AL390955.1-201ENST00000428694 934 ntBASIC17.69■□□□□ 0.42
KRT4P19013 PVRIG2P-201ENST00000435460 978 ntBASIC17.69■□□□□ 0.42
KRT4P19013 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 FITM1-202ENST00000559294 800 ntBASIC17.69■□□□□ 0.42
KRT4P19013 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
KRT4P19013 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT4P19013 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT4P19013 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.68■□□□□ 0.42
KRT4P19013 CROCCP1-201ENST00000426910 5675 ntBASIC17.68■□□□□ 0.42
KRT4P19013 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.68■□□□□ 0.42
KRT4P19013 AC113404.2-201ENST00000507884 177 ntBASIC17.68■□□□□ 0.42
KRT4P19013 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT4P19013 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 AP000525.1-201ENST00000608286 694 ntBASIC17.68■□□□□ 0.42
KRT4P19013 AC092865.7-201ENST00000641832 219 ntBASIC17.68■□□□□ 0.42
KRT4P19013 AC008894.3-201ENST00000624324 3103 ntBASIC17.68■□□□□ 0.42
KRT4P19013 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT4P19013 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KRT4P19013 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KRT4P19013 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT4P19013 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
KRT4P19013 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT4P19013 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT4P19013 AC005915.1-201ENST00000624912 2018 ntBASIC17.67■□□□□ 0.42
KRT4P19013 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT4P19013 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms