Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ACTG1P4-201ENST00000425123 1122 ntBASIC18.19■□□□□ 0.5
HMGA1P17096 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA1P17096 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA1P17096 PRSS29P-201ENST00000440800 595 ntBASIC18.19■□□□□ 0.5
HMGA1P17096 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGA1P17096 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA1P17096 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGA1P17096 HCG4B-203ENST00000450128 991 ntBASIC18.19■□□□□ 0.5
HMGA1P17096 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGA1P17096 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HMGA1P17096 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGA1P17096 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGA1P17096 AC055717.3-201ENST00000622967 595 ntBASIC18.19■□□□□ 0.5
HMGA1P17096 LINC01451-201ENST00000623792 534 ntBASIC18.19■□□□□ 0.5
HMGA1P17096 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGA1P17096 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGA1P17096 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGA1P17096 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HMGA1P17096 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
HMGA1P17096 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMGA1P17096 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGA1P17096 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGA1P17096 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 AP002414.1-201ENST00000391405 1147 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA1P17096 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 GPX1P2-201ENST00000429271 606 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA1P17096 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA1P17096 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGA1P17096 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 AC010327.4-202ENST00000591484 748 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGA1P17096 AC046185.3-201ENST00000623228 1824 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 AL135999.2-201ENST00000622438 1686 ntBASIC18.18■□□□□ 0.5
HMGA1P17096 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGA1P17096 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGA1P17096 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGA1P17096 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMGA1P17096 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 AC112482.1-201ENST00000492080 688 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGA1P17096 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGA1P17096 OR7E47P-204ENST00000575924 449 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 MIR4751-201ENST00000578027 74 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGA1P17096 AL139327.4-201ENST00000612362 153 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 LINC00304-203ENST00000565008 1864 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGA1P17096 AL590787.1-201ENST00000568856 1315 ntBASIC18.17■□□□□ 0.5
HMGA1P17096 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGA1P17096 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.17■□□□□ 0.5
HMGA1P17096 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGA1P17096 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA1P17096 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGA1P17096 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGA1P17096 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms