Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A1P12107 ABALON-201ENST00000629058 1903 ntBASIC19.84■□□□□ 0.77
COL11A1P12107 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL11A1P12107 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.83■□□□□ 0.77
COL11A1P12107 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.83■□□□□ 0.77
COL11A1P12107 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 AC107918.2-201ENST00000530817 355 ntBASIC19.83■□□□□ 0.77
COL11A1P12107 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
COL11A1P12107 AC023141.13-201ENST00000604991 943 ntBASIC19.83■□□□□ 0.77
COL11A1P12107 AC099522.2-201ENST00000607001 744 ntBASIC19.83■□□□□ 0.77
COL11A1P12107 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.83■□□□□ 0.77
COL11A1P12107 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL11A1P12107 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.83■□□□□ 0.76
COL11A1P12107 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A1P12107 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A1P12107 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
COL11A1P12107 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
COL11A1P12107 CEND1P1-201ENST00000451006 455 ntBASIC19.83■□□□□ 0.76
COL11A1P12107 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.83■□□□□ 0.76
COL11A1P12107 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A1P12107 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A1P12107 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL11A1P12107 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.83■□□□□ 0.76
COL11A1P12107 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
COL11A1P12107 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A1P12107 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.82■□□□□ 0.76
COL11A1P12107 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL11A1P12107 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A1P12107 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.82■□□□□ 0.76
COL11A1P12107 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 SLC25A1P3-201ENST00000395415 828 ntBASIC19.82■□□□□ 0.76
COL11A1P12107 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.82■□□□□ 0.76
COL11A1P12107 CXCL1P1-201ENST00000502804 216 ntBASIC19.82■□□□□ 0.76
COL11A1P12107 RFPL4AP1-201ENST00000530883 850 ntBASIC19.82■□□□□ 0.76
COL11A1P12107 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL11A1P12107 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.82■□□□□ 0.76
COL11A1P12107 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 AL354751.1-201ENST00000412768 1863 ntBASIC19.82■□□□□ 0.76
COL11A1P12107 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.82■□□□□ 0.76
COL11A1P12107 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL11A1P12107 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL11A1P12107 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 LINC01451-201ENST00000623792 534 ntBASIC19.81■□□□□ 0.76
COL11A1P12107 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A1P12107 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.81■□□□□ 0.76
COL11A1P12107 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.81■□□□□ 0.76
COL11A1P12107 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A1P12107 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.81■□□□□ 0.76
COL11A1P12107 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.81■□□□□ 0.76
COL11A1P12107 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A1P12107 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms