Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SPDYE9P-201ENST00000570642 692 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 SPDYE10P-202ENST00000612005 668 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 SPDYE8P-202ENST00000612377 668 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 AP001059.3-201ENST00000619053 235 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC30.47■■■□□ 2.47
TOP2AP11388 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
TOP2AP11388 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
TOP2AP11388 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
TOP2AP11388 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
TOP2AP11388 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC30.47■■■□□ 2.47
TOP2AP11388 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC30.47■■■□□ 2.47
TOP2AP11388 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC30.47■■■□□ 2.47
TOP2AP11388 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC30.47■■■□□ 2.47
TOP2AP11388 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC30.47■■■□□ 2.47
TOP2AP11388 AL645728.2-201ENST00000641974 660 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC30.47■■■□□ 2.47
TOP2AP11388 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC30.46■■■□□ 2.47
TOP2AP11388 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC30.46■■■□□ 2.47
TOP2AP11388 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC30.46■■■□□ 2.47
TOP2AP11388 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
TOP2AP11388 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP2AP11388 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC30.46■■■□□ 2.47
TOP2AP11388 HNRNPRP1-201ENST00000453465 1695 ntBASIC30.46■■■□□ 2.47
TOP2AP11388 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP2AP11388 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP2AP11388 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC30.46■■■□□ 2.47
TOP2AP11388 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC30.46■■■□□ 2.47
TOP2AP11388 AC079140.1-201ENST00000508039 487 ntBASIC30.46■■■□□ 2.47
TOP2AP11388 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC30.46■■■□□ 2.47
TOP2AP11388 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC30.46■■■□□ 2.47
TOP2AP11388 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC30.46■■■□□ 2.47
TOP2AP11388 INO80C-206ENST00000586489 594 ntTSL 3 BASIC30.46■■■□□ 2.47
TOP2AP11388 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TOP2AP11388 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC30.46■■■□□ 2.47
TOP2AP11388 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC30.45■■■□□ 2.47
TOP2AP11388 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC30.45■■■□□ 2.47
TOP2AP11388 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
TOP2AP11388 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC30.45■■■□□ 2.47
TOP2AP11388 GATB-205ENST00000508611 605 ntTSL 2 BASIC30.45■■■□□ 2.47
TOP2AP11388 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC30.45■■■□□ 2.47
TOP2AP11388 VPS29-207ENST00000549970 818 ntTSL 3 BASIC30.45■■■□□ 2.47
TOP2AP11388 RARRES2P8-201ENST00000566335 367 ntBASIC30.45■■■□□ 2.47
TOP2AP11388 AL139327.4-201ENST00000612362 153 ntBASIC30.45■■■□□ 2.47
TOP2AP11388 BSG-214ENST00000614867 960 ntTSL 3 BASIC30.45■■■□□ 2.47
TOP2AP11388 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
TOP2AP11388 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
TOP2AP11388 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC30.45■■■□□ 2.46
TOP2AP11388 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC30.45■■■□□ 2.46
TOP2AP11388 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
TOP2AP11388 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 MIR661-201ENST00000384842 89 ntBASIC30.44■■■□□ 2.46
TOP2AP11388 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 CNN2P2-201ENST00000443536 909 ntBASIC30.44■■■□□ 2.46
TOP2AP11388 CNN2P3-201ENST00000450201 906 ntBASIC30.44■■■□□ 2.46
TOP2AP11388 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC30.44■■■□□ 2.46
TOP2AP11388 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC30.44■■■□□ 2.46
TOP2AP11388 AL136317.3-201ENST00000618497 906 ntBASIC30.44■■■□□ 2.46
TOP2AP11388 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
TOP2AP11388 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
TOP2AP11388 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TOP2AP11388 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
TOP2AP11388 PMS2P4-201ENST00000412466 1052 ntBASIC30.43■■■□□ 2.46
TOP2AP11388 FAM58DP-201ENST00000428076 619 ntBASIC30.43■■■□□ 2.46
TOP2AP11388 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC30.43■■■□□ 2.46
TOP2AP11388 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC30.43■■■□□ 2.46
TOP2AP11388 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC30.43■■■□□ 2.46
TOP2AP11388 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC30.43■■■□□ 2.46
TOP2AP11388 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC30.43■■■□□ 2.46
TOP2AP11388 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC30.43■■■□□ 2.46
TOP2AP11388 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC30.43■■■□□ 2.46
TOP2AP11388 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
TOP2AP11388 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
TOP2AP11388 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 AC239800.4-201ENST00000603712 296 ntBASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms