Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM228BP0C875 HOMER2P1-201ENST00000455653 964 ntBASIC18.78■□□□□ 0.6
FAM228BP0C875 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FAM228BP0C875 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
FAM228BP0C875 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM228BP0C875 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FAM228BP0C875 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM228BP0C875 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM228BP0C875 Z83836.1-201ENST00000624605 1642 ntBASIC18.78■□□□□ 0.6
FAM228BP0C875 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
FAM228BP0C875 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 AGGF1P2-201ENST00000426656 2106 ntBASIC18.77■□□□□ 0.6
FAM228BP0C875 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM228BP0C875 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.77■□□□□ 0.6
FAM228BP0C875 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.77■□□□□ 0.6
FAM228BP0C875 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
FAM228BP0C875 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FAM228BP0C875 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM228BP0C875 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM228BP0C875 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FAM228BP0C875 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FAM228BP0C875 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.77■□□□□ 0.59
FAM228BP0C875 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.77■□□□□ 0.59
FAM228BP0C875 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
FAM228BP0C875 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 AC097374.2-201ENST00000618617 1306 ntBASIC18.76■□□□□ 0.59
FAM228BP0C875 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FAM228BP0C875 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FAM228BP0C875 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
FAM228BP0C875 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FAM228BP0C875 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 SLC25A1P3-201ENST00000395415 828 ntBASIC18.76■□□□□ 0.59
FAM228BP0C875 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.76■□□□□ 0.59
FAM228BP0C875 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.76■□□□□ 0.59
FAM228BP0C875 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 AC046185.3-201ENST00000623228 1824 ntBASIC18.76■□□□□ 0.59
FAM228BP0C875 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
FAM228BP0C875 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM228BP0C875 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
FAM228BP0C875 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
FAM228BP0C875 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM228BP0C875 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM228BP0C875 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FAM228BP0C875 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.75■□□□□ 0.59
FAM228BP0C875 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
FAM228BP0C875 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms