Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 Z83851.2-201ENST00000609564 659 ntBASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 AC116407.2-201ENST00000613639 860 ntBASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 RNA5SP415-201ENST00000517246 115 ntBASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 AC034105.1-201ENST00000563488 319 ntBASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 AC006557.2-201ENST00000592985 1240 ntBASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 AC073592.5-201ENST00000624854 528 ntBASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 PGM5P2-202ENST00000637225 1043 ntBASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB40ALP0C0E4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40ALP0C0E4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 MIR940-201ENST00000401276 94 ntBASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 AL353593.2-201ENST00000602529 1483 ntBASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 ABALON-201ENST00000629058 1903 ntBASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40ALP0C0E4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms