Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSDP07339 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CTSDP07339 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CTSDP07339 LINC01311-201ENST00000565162 1445 ntBASIC14.65□□□□□ -0.06
CTSDP07339 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSDP07339 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CTSDP07339 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSDP07339 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.64□□□□□ -0.07
CTSDP07339 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CTSDP07339 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CTSDP07339 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 AC005104.2-201ENST00000427818 678 ntBASIC14.64□□□□□ -0.07
CTSDP07339 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.64□□□□□ -0.07
CTSDP07339 UBE2SP1-201ENST00000450587 669 ntBASIC14.64□□□□□ -0.07
CTSDP07339 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.64□□□□□ -0.07
CTSDP07339 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSDP07339 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.64□□□□□ -0.07
CTSDP07339 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CTSDP07339 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 KRT8P47-201ENST00000604727 1398 ntBASIC14.63□□□□□ -0.07
CTSDP07339 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 BX276092.7-203ENST00000637198 1536 ntBASIC14.63□□□□□ -0.07
CTSDP07339 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 KRT18P65-201ENST00000439811 1286 ntBASIC14.63□□□□□ -0.07
CTSDP07339 AC113404.2-201ENST00000507884 177 ntBASIC14.63□□□□□ -0.07
CTSDP07339 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CTSDP07339 BX088651.1-201ENST00000540551 451 ntBASIC14.63□□□□□ -0.07
CTSDP07339 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CTSDP07339 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.63□□□□□ -0.07
CTSDP07339 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.63□□□□□ -0.07
CTSDP07339 PCDH8P1-201ENST00000428983 2773 ntBASIC14.63□□□□□ -0.07
CTSDP07339 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CTSDP07339 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CTSDP07339 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms