Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 IGHGP-201ENST00000390555 1178 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 DDX43P3-201ENST00000441064 443 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 AC112907.2-201ENST00000448639 330 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 LINC01238-205ENST00000567549 1107 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 LINC01311-201ENST00000565162 1445 ntBASIC16.1■□□□□ 0.17
HIST1H2ABP04908 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H2ABP04908 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC124067.4-201ENST00000519691 2379 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC133963.1-201ENST00000504166 1679 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 MIR662-201ENST00000384847 95 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 GPR32P1-201ENST00000601788 811 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC009949.1-201ENST00000623048 1830 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AL353692.3-201ENST00000407031 1396 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 TNRC18P3-201ENST00000441896 2691 ntBASIC16.09■□□□□ 0.17
HIST1H2ABP04908 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H2ABP04908 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H2ABP04908 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 AC141586.5-201ENST00000624546 2050 ntBASIC16.08■□□□□ 0.16
HIST1H2ABP04908 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 HBZP1-201ENST00000354915 429 ntBASIC16.08■□□□□ 0.16
HIST1H2ABP04908 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 AC112698.1-201ENST00000510299 916 ntBASIC16.08■□□□□ 0.16
HIST1H2ABP04908 LINC01451-201ENST00000623792 534 ntBASIC16.08■□□□□ 0.16
HIST1H2ABP04908 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H2ABP04908 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms