Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.48■□□□□ 0.23
OPN1SWP03999 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.48■□□□□ 0.23
OPN1SWP03999 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
OPN1SWP03999 AL121761.2-201ENST00000598007 1648 ntBASIC16.48■□□□□ 0.23
OPN1SWP03999 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
OPN1SWP03999 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.48■□□□□ 0.23
OPN1SWP03999 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPN1SWP03999 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.47■□□□□ 0.23
OPN1SWP03999 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.47■□□□□ 0.23
OPN1SWP03999 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
OPN1SWP03999 AL596275.1-201ENST00000423464 877 ntBASIC16.47■□□□□ 0.23
OPN1SWP03999 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 SPDYE15P-201ENST00000424157 909 ntBASIC16.47■□□□□ 0.23
OPN1SWP03999 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.47■□□□□ 0.23
OPN1SWP03999 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.47■□□□□ 0.23
OPN1SWP03999 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 KRT89P-201ENST00000620027 1478 ntBASIC16.47■□□□□ 0.23
OPN1SWP03999 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.47■□□□□ 0.23
OPN1SWP03999 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPN1SWP03999 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
OPN1SWP03999 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
OPN1SWP03999 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 AC010203.1-204ENST00000548782 407 ntBASIC16.46■□□□□ 0.23
OPN1SWP03999 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.46■□□□□ 0.23
OPN1SWP03999 AL441883.1-201ENST00000566170 1045 ntBASIC16.46■□□□□ 0.23
OPN1SWP03999 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
OPN1SWP03999 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
OPN1SWP03999 LYSMD4-203ENST00000378904 2122 ntBASIC16.46■□□□□ 0.23
OPN1SWP03999 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPN1SWP03999 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPN1SWP03999 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPN1SWP03999 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPN1SWP03999 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
OPN1SWP03999 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPN1SWP03999 TNRC18P3-201ENST00000441896 2691 ntBASIC16.45■□□□□ 0.22
OPN1SWP03999 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.45■□□□□ 0.22
OPN1SWP03999 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPN1SWP03999 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPN1SWP03999 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPN1SWP03999 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms