Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KRT19P2-202ENST00000557173 1012 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 PDPK2P-202ENST00000562415 1191 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 SNHG9-202ENST00000564014 471 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CHRNA1P02708 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRNA1P02708 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CHRNA1P02708 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHRNA1P02708 ELL2P1-201ENST00000413990 1906 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 FLJ13224-201ENST00000313737 1514 ntBASIC19.05■□□□□ 0.64
CHRNA1P02708 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 BCAR1-209ENST00000546196 1340 ntBASIC19.05■□□□□ 0.64
CHRNA1P02708 AL590787.1-201ENST00000568856 1315 ntBASIC19.05■□□□□ 0.64
CHRNA1P02708 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA1P02708 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA1P02708 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA1P02708 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA1P02708 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA1P02708 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRNA1P02708 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRNA1P02708 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHRNA1P02708 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA1P02708 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA1P02708 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHRNA1P02708 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHRNA1P02708 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA1P02708 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHRNA1P02708 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHRNA1P02708 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA1P02708 ACTG1P4-201ENST00000425123 1122 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.04■□□□□ 0.64
CHRNA1P02708 AL031432.2-201ENST00000566714 459 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 AL928711.1-201ENST00000570165 459 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA1P02708 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CHRNA1P02708 PI4KAP1-204ENST00000612579 1703 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHRNA1P02708 AC104581.1-202ENST00000635932 2618 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA1P02708 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA1P02708 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 REXO1L11P-201ENST00000620964 1927 ntBASIC19.04■□□□□ 0.64
CHRNA1P02708 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA1P02708 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA1P02708 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA1P02708 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA1P02708 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CHRNA1P02708 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 AC025580.3-201ENST00000617932 1424 ntBASIC19.03■□□□□ 0.64
CHRNA1P02708 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHRNA1P02708 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA1P02708 METTL21AP1-201ENST00000438852 635 ntBASIC19.03■□□□□ 0.64
CHRNA1P02708 CEND1P1-201ENST00000451006 455 ntBASIC19.03■□□□□ 0.64
CHRNA1P02708 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA1P02708 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA1P02708 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms