Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC104390.1-201ENST00000555663 520 ntBASIC18.43■□□□□ 0.54
LMNAP02545 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.43■□□□□ 0.54
LMNAP02545 BNIP3P18-201ENST00000593976 575 ntBASIC18.43■□□□□ 0.54
LMNAP02545 AC092364.2-202ENST00000597012 1073 ntBASIC18.43■□□□□ 0.54
LMNAP02545 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
LMNAP02545 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
LMNAP02545 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LMNAP02545 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LMNAP02545 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LMNAP02545 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
LMNAP02545 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LMNAP02545 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.42■□□□□ 0.54
LMNAP02545 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.42■□□□□ 0.54
LMNAP02545 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.42■□□□□ 0.54
LMNAP02545 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.42■□□□□ 0.54
LMNAP02545 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.42■□□□□ 0.54
LMNAP02545 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 SART3-203ENST00000546611 1184 ntBASIC18.42■□□□□ 0.54
LMNAP02545 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.42■□□□□ 0.54
LMNAP02545 AC239800.4-201ENST00000603712 296 ntBASIC18.42■□□□□ 0.54
LMNAP02545 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 KRT18P28-201ENST00000453838 1332 ntBASIC18.42■□□□□ 0.54
LMNAP02545 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LMNAP02545 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.42■□□□□ 0.54
LMNAP02545 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LMNAP02545 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.41■□□□□ 0.54
LMNAP02545 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.41■□□□□ 0.54
LMNAP02545 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LMNAP02545 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.41■□□□□ 0.54
LMNAP02545 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.41■□□□□ 0.54
LMNAP02545 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.41■□□□□ 0.54
LMNAP02545 AC096582.2-201ENST00000510860 516 ntBASIC18.41■□□□□ 0.54
LMNAP02545 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.41■□□□□ 0.54
LMNAP02545 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 AC114341.1-201ENST00000618070 349 ntBASIC18.41■□□□□ 0.54
LMNAP02545 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.41■□□□□ 0.54
LMNAP02545 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LMNAP02545 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.41■□□□□ 0.54
LMNAP02545 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LMNAP02545 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.4■□□□□ 0.54
LMNAP02545 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LMNAP02545 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.4■□□□□ 0.54
LMNAP02545 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.4■□□□□ 0.54
LMNAP02545 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
LMNAP02545 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LMNAP02545 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.4■□□□□ 0.54
LMNAP02545 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.4■□□□□ 0.54
LMNAP02545 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.4■□□□□ 0.54
LMNAP02545 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LMNAP02545 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms