Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.07■□□□□ 0.48
MT-CO1P00395 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.07■□□□□ 0.48
MT-CO1P00395 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-CO1P00395 AP001269.4-201ENST00000609611 512 ntBASIC18.07■□□□□ 0.48
MT-CO1P00395 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
MT-CO1P00395 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.07■□□□□ 0.48
MT-CO1P00395 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-CO1P00395 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MT-CO1P00395 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.07■□□□□ 0.48
MT-CO1P00395 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MT-CO1P00395 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MT-CO1P00395 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-CO1P00395 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-CO1P00395 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
MT-CO1P00395 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 AL121912.1-201ENST00000603683 238 ntBASIC18.06■□□□□ 0.48
MT-CO1P00395 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
MT-CO1P00395 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-CO1P00395 PKD1P1-201ENST00000458669 6805 ntBASIC18.06■□□□□ 0.48
MT-CO1P00395 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-CO1P00395 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MT-CO1P00395 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
MT-CO1P00395 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 KRT18P55-202ENST00000578578 1546 ntBASIC18.05■□□□□ 0.48
MT-CO1P00395 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 FAM220CP-201ENST00000395253 831 ntBASIC18.05■□□□□ 0.48
MT-CO1P00395 AC009078.2-202ENST00000463353 338 ntBASIC18.05■□□□□ 0.48
MT-CO1P00395 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.05■□□□□ 0.48
MT-CO1P00395 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MT-CO1P00395 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-CO1P00395 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
MT-CO1P00395 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MT-CO1P00395 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-CO1P00395 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-CO1P00395 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-CO1P00395 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-CO1P00395 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms