Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.99■□□□□ 0.95
MBD4O95243 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.99■□□□□ 0.95
MBD4O95243 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
MBD4O95243 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.99■□□□□ 0.95
MBD4O95243 STK19B-204ENST00000512515 211 ntBASIC20.99■□□□□ 0.95
MBD4O95243 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.99■□□□□ 0.95
MBD4O95243 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.99■□□□□ 0.95
MBD4O95243 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.99■□□□□ 0.95
MBD4O95243 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
MBD4O95243 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD4O95243 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MBD4O95243 AC243591.1-201ENST00000452967 1364 ntBASIC20.98■□□□□ 0.95
MBD4O95243 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 AC009336.1-201ENST00000608941 1553 ntBASIC20.98■□□□□ 0.95
MBD4O95243 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD4O95243 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MBD4O95243 OR7E14P-202ENST00000530490 1290 ntBASIC20.98■□□□□ 0.95
MBD4O95243 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD4O95243 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD4O95243 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD4O95243 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD4O95243 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MBD4O95243 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MBD4O95243 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD4O95243 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD4O95243 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD4O95243 AC012640.2-201ENST00000561606 901 ntBASIC20.97■□□□□ 0.95
MBD4O95243 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.97■□□□□ 0.95
MBD4O95243 LINC01451-201ENST00000623792 534 ntBASIC20.97■□□□□ 0.95
MBD4O95243 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD4O95243 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MBD4O95243 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD4O95243 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD4O95243 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD4O95243 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD4O95243 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
MBD4O95243 MYCLP1-201ENST00000372451 1075 ntBASIC20.96■□□□□ 0.95
MBD4O95243 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MBD4O95243 PRYP5-201ENST00000451909 266 ntBASIC20.96■□□□□ 0.95
MBD4O95243 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.96■□□□□ 0.95
MBD4O95243 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD4O95243 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms