Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 AC005104.2-201ENST00000427818 678 ntBASIC17.82■□□□□ 0.44
CDH16O75309 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH16O75309 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CDH16O75309 AC116562.4-202ENST00000641738 218 ntBASIC17.82■□□□□ 0.44
CDH16O75309 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH16O75309 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH16O75309 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 AC046158.3-201ENST00000624947 2558 ntBASIC17.82■□□□□ 0.44
CDH16O75309 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH16O75309 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDH16O75309 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 AC005915.1-201ENST00000624912 2018 ntBASIC17.81■□□□□ 0.44
CDH16O75309 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CDH16O75309 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 AC007663.1-201ENST00000438948 1240 ntBASIC17.81■□□□□ 0.44
CDH16O75309 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.81■□□□□ 0.44
CDH16O75309 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 AC113410.3-201ENST00000623366 203 ntBASIC17.81■□□□□ 0.44
CDH16O75309 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH16O75309 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 BX276092.7-203ENST00000637198 1536 ntBASIC17.81■□□□□ 0.44
CDH16O75309 AL139384.1-201ENST00000612143 3047 ntBASIC17.81■□□□□ 0.44
CDH16O75309 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
CDH16O75309 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH16O75309 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CDH16O75309 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH16O75309 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 AL603756.1-201ENST00000606511 2163 ntBASIC17.8■□□□□ 0.44
CDH16O75309 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDH16O75309 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CDH16O75309 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 PVRIG2P-201ENST00000435460 978 ntBASIC17.8■□□□□ 0.44
CDH16O75309 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH16O75309 MIR3917-201ENST00000580971 93 ntBASIC17.8■□□□□ 0.44
CDH16O75309 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDH16O75309 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH16O75309 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH16O75309 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDH16O75309 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
CDH16O75309 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH16O75309 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH16O75309 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms