Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 MYCLP1-201ENST00000372451 1075 ntBASIC20.5■□□□□ 0.87
CTNND1O60716 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CTNND1O60716 LINC00982-205ENST00000420957 435 ntBASIC20.5■□□□□ 0.87
CTNND1O60716 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.5■□□□□ 0.87
CTNND1O60716 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CTNND1O60716 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNND1O60716 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.5■□□□□ 0.87
CTNND1O60716 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CTNND1O60716 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CTNND1O60716 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.49■□□□□ 0.87
CTNND1O60716 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.49■□□□□ 0.87
CTNND1O60716 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.49■□□□□ 0.87
CTNND1O60716 OR7E47P-204ENST00000575924 449 ntBASIC20.49■□□□□ 0.87
CTNND1O60716 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CTNND1O60716 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.49■□□□□ 0.87
CTNND1O60716 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTNND1O60716 ELL2P1-201ENST00000413990 1906 ntBASIC20.49■□□□□ 0.87
CTNND1O60716 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTNND1O60716 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CTNND1O60716 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CTNND1O60716 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNND1O60716 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 RHOQP3-201ENST00000437982 621 ntBASIC20.48■□□□□ 0.87
CTNND1O60716 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNND1O60716 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CTNND1O60716 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 PDPK2P-202ENST00000562415 1191 ntBASIC20.48■□□□□ 0.87
CTNND1O60716 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CTNND1O60716 AL078644.1-201ENST00000609881 752 ntBASIC20.48■□□□□ 0.87
CTNND1O60716 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 AC004877.2-201ENST00000623941 599 ntBASIC20.48■□□□□ 0.87
CTNND1O60716 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 AC010507.1-201ENST00000633895 436 ntBASIC20.48■□□□□ 0.87
CTNND1O60716 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
CTNND1O60716 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.48■□□□□ 0.87
CTNND1O60716 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTNND1O60716 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.47■□□□□ 0.87
CTNND1O60716 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CTNND1O60716 METTL21AP1-201ENST00000438852 635 ntBASIC20.47■□□□□ 0.87
CTNND1O60716 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTNND1O60716 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CTNND1O60716 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.47■□□□□ 0.87
CTNND1O60716 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNND1O60716 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNND1O60716 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTNND1O60716 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
CTNND1O60716 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNND1O60716 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.46■□□□□ 0.87
CTNND1O60716 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.46■□□□□ 0.87
CTNND1O60716 CNN2P11-201ENST00000429351 262 ntBASIC20.46■□□□□ 0.87
CTNND1O60716 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms