Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.28■■□□□ 1
GRIN3BO60391 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 AC027369.6-201ENST00000525520 931 ntBASIC21.28■■□□□ 1
GRIN3BO60391 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.28■■□□□ 1
GRIN3BO60391 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.28■■□□□ 1
GRIN3BO60391 AC106886.1-201ENST00000568660 600 ntBASIC21.28■■□□□ 1
GRIN3BO60391 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 STK25P1-201ENST00000585406 838 ntBASIC21.28■■□□□ 1
GRIN3BO60391 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
GRIN3BO60391 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.28■■□□□ 1
GRIN3BO60391 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.28■■□□□ 1
GRIN3BO60391 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
GRIN3BO60391 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.27■■□□□ 1
GRIN3BO60391 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.27■■□□□ 1
GRIN3BO60391 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
GRIN3BO60391 AC079776.1-201ENST00000401540 1152 ntBASIC21.27■■□□□ 1
GRIN3BO60391 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 AC004945.1-201ENST00000416738 983 ntBASIC21.27■■□□□ 1
GRIN3BO60391 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.27■■□□□ 1
GRIN3BO60391 TSSK5P-201ENST00000423978 907 ntBASIC21.27■■□□□ 1
GRIN3BO60391 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.27■■□□□ 1
GRIN3BO60391 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
GRIN3BO60391 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.27■■□□□ 1
GRIN3BO60391 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.27■■□□□ 1
GRIN3BO60391 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.27■■□□□ 1
GRIN3BO60391 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.27■■□□□ 1
GRIN3BO60391 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.27■■□□□ 1
GRIN3BO60391 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GRIN3BO60391 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.27■□□□□ 0.99
GRIN3BO60391 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.27■□□□□ 0.99
GRIN3BO60391 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
GRIN3BO60391 AC129492.6-201ENST00000611383 1305 ntBASIC21.27■□□□□ 0.99
GRIN3BO60391 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.27■□□□□ 0.99
GRIN3BO60391 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GRIN3BO60391 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GRIN3BO60391 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GRIN3BO60391 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.26■□□□□ 0.99
GRIN3BO60391 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GRIN3BO60391 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.26■□□□□ 0.99
GRIN3BO60391 AC073592.8-201ENST00000624126 511 ntBASIC21.26■□□□□ 0.99
GRIN3BO60391 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GRIN3BO60391 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.26■□□□□ 0.99
GRIN3BO60391 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.26■□□□□ 0.99
GRIN3BO60391 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
GRIN3BO60391 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 AL353779.1-201ENST00000434793 351 ntBASIC21.25■□□□□ 0.99
GRIN3BO60391 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.25■□□□□ 0.99
GRIN3BO60391 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.25■□□□□ 0.99
GRIN3BO60391 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 AC019129.2-201ENST00000609837 1235 ntBASIC21.25■□□□□ 0.99
GRIN3BO60391 IGHV3-72-202ENST00000621503 303 ntBASIC21.25■□□□□ 0.99
GRIN3BO60391 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
GRIN3BO60391 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
GRIN3BO60391 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GRIN3BO60391 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.24■□□□□ 0.99
GRIN3BO60391 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
GRIN3BO60391 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
GRIN3BO60391 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.24■□□□□ 0.99
GRIN3BO60391 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms