Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 BNIP3P18-201ENST00000593976 575 ntBASIC15.71■□□□□ 0.11
TRAF3IP2O43734 AC011467.2-201ENST00000598425 242 ntBASIC15.71■□□□□ 0.11
TRAF3IP2O43734 AC019129.2-201ENST00000609837 1235 ntBASIC15.71■□□□□ 0.11
TRAF3IP2O43734 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAF3IP2O43734 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP2O43734 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP2O43734 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP2O43734 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP2O43734 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAF3IP2O43734 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AP000867.3-201ENST00000524675 377 ntBASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AC074051.2-201ENST00000565115 352 ntBASIC15.7■□□□□ 0.1
TRAF3IP2O43734 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AC092329.2-201ENST00000598402 547 ntBASIC15.7■□□□□ 0.1
TRAF3IP2O43734 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
TRAF3IP2O43734 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 MINOS1P3-201ENST00000457048 203 ntBASIC15.69■□□□□ 0.1
TRAF3IP2O43734 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 AC104819.1-201ENST00000504587 486 ntBASIC15.69■□□□□ 0.1
TRAF3IP2O43734 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 AC012615.1-201ENST00000565797 1299 ntBASIC15.69■□□□□ 0.1
TRAF3IP2O43734 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.69■□□□□ 0.1
TRAF3IP2O43734 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 TP73-AS1-210ENST00000637775 1455 ntBASIC15.69■□□□□ 0.1
TRAF3IP2O43734 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP2O43734 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms