Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SNAI2O43623 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SNAI2O43623 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SNAI2O43623 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.23□□□□□ -0.29
SNAI2O43623 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.23□□□□□ -0.29
SNAI2O43623 RARRES2P10-201ENST00000564312 460 ntBASIC13.23□□□□□ -0.29
SNAI2O43623 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SNAI2O43623 AF186192.3-201ENST00000583427 947 ntBASIC13.23□□□□□ -0.29
SNAI2O43623 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 DGCR10-201ENST00000609839 495 ntBASIC13.23□□□□□ -0.29
SNAI2O43623 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.23□□□□□ -0.29
SNAI2O43623 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNAI2O43623 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
SNAI2O43623 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.23□□□□□ -0.29
SNAI2O43623 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SNAI2O43623 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNAI2O43623 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 AL355802.2-201ENST00000402069 882 ntBASIC13.22□□□□□ -0.29
SNAI2O43623 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 AC099343.3-201ENST00000605834 2503 ntBASIC13.22□□□□□ -0.29
SNAI2O43623 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.22□□□□□ -0.29
SNAI2O43623 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNAI2O43623 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SNAI2O43623 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.21□□□□□ -0.29
SNAI2O43623 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms