Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RRP8O43159 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RRP8O43159 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RRP8O43159 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RRP8O43159 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
RRP8O43159 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.51■□□□□ 0.23
RRP8O43159 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 AC004461.1-201ENST00000412461 403 ntBASIC16.51■□□□□ 0.23
RRP8O43159 IGLL3P-201ENST00000412472 434 ntBASIC16.51■□□□□ 0.23
RRP8O43159 AC015922.1-201ENST00000421102 1152 ntBASIC16.51■□□□□ 0.23
RRP8O43159 AC023141.5-201ENST00000458585 616 ntBASIC16.51■□□□□ 0.23
RRP8O43159 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.51■□□□□ 0.23
RRP8O43159 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.51■□□□□ 0.23
RRP8O43159 AC105339.1-204ENST00000636249 355 ntBASIC16.51■□□□□ 0.23
RRP8O43159 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RRP8O43159 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RRP8O43159 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.5■□□□□ 0.23
RRP8O43159 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.5■□□□□ 0.23
RRP8O43159 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.5■□□□□ 0.23
RRP8O43159 SIGLEC30P-201ENST00000455569 941 ntBASIC16.5■□□□□ 0.23
RRP8O43159 HLA-J-202ENST00000469281 1241 ntBASIC16.5■□□□□ 0.23
RRP8O43159 AC093214.1-201ENST00000511688 1107 ntBASIC16.5■□□□□ 0.23
RRP8O43159 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.5■□□□□ 0.23
RRP8O43159 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.5■□□□□ 0.23
RRP8O43159 AL353135.1-201ENST00000606729 504 ntBASIC16.5■□□□□ 0.23
RRP8O43159 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RRP8O43159 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.5■□□□□ 0.23
RRP8O43159 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
RRP8O43159 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RRP8O43159 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RRP8O43159 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
RRP8O43159 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.49■□□□□ 0.23
RRP8O43159 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.49■□□□□ 0.23
RRP8O43159 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RRP8O43159 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 TERF1P3-201ENST00000505638 1227 ntBASIC16.49■□□□□ 0.23
RRP8O43159 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.49■□□□□ 0.23
RRP8O43159 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.49■□□□□ 0.23
RRP8O43159 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.49■□□□□ 0.23
RRP8O43159 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.49■□□□□ 0.23
RRP8O43159 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RRP8O43159 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
RRP8O43159 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms