Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.38■□□□□ 0.21
CACNA1AO00555 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNA1AO00555 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.38■□□□□ 0.21
CACNA1AO00555 AC104989.1-201ENST00000519711 778 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNA1AO00555 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.38■□□□□ 0.21
CACNA1AO00555 AC007967.4-201ENST00000614700 386 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNA1AO00555 AC015967.2-201ENST00000624092 234 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 AC006435.4-201ENST00000625037 234 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 AL356737.1-201ENST00000634391 234 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.38■□□□□ 0.21
CACNA1AO00555 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNA1AO00555 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CACNA1AO00555 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNA1AO00555 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.38■□□□□ 0.21
CACNA1AO00555 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNA1AO00555 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNA1AO00555 ZNF890P-202ENST00000530367 1156 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 MIR4706-201ENST00000582134 82 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 RN7SL219P-201ENST00000582872 296 ntBASIC16.38■□□□□ 0.21
CACNA1AO00555 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNA1AO00555 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CACNA1AO00555 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.37■□□□□ 0.21
CACNA1AO00555 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CACNA1AO00555 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CACNA1AO00555 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.37■□□□□ 0.21
CACNA1AO00555 AC079328.1-201ENST00000560358 952 ntBASIC16.37■□□□□ 0.21
CACNA1AO00555 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 CLDN5-201ENST00000403084 2357 ntBASIC16.37■□□□□ 0.21
CACNA1AO00555 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.37■□□□□ 0.21
CACNA1AO00555 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.37■□□□□ 0.21
CACNA1AO00555 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.37■□□□□ 0.21
CACNA1AO00555 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNA1AO00555 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNA1AO00555 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNA1AO00555 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CACNA1AO00555 IGHJ2P-201ENST00000454480 60 ntBASIC16.37■□□□□ 0.21
CACNA1AO00555 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.37■□□□□ 0.21
CACNA1AO00555 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CACNA1AO00555 AL161645.1-201ENST00000622716 1255 ntBASIC16.37■□□□□ 0.21
CACNA1AO00555 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.36■□□□□ 0.21
CACNA1AO00555 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CACNA1AO00555 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CACNA1AO00555 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CACNA1AO00555 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.36■□□□□ 0.21
CACNA1AO00555 PKD1P6-201ENST00000343738 4769 ntBASIC16.36■□□□□ 0.21
CACNA1AO00555 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.36■□□□□ 0.21
CACNA1AO00555 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CACNA1AO00555 MIR1247-201ENST00000408206 136 ntBASIC16.36■□□□□ 0.21
CACNA1AO00555 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.36■□□□□ 0.21
CACNA1AO00555 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.36■□□□□ 0.21
CACNA1AO00555 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.36■□□□□ 0.21
CACNA1AO00555 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.36■□□□□ 0.21
CACNA1AO00555 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.36■□□□□ 0.21
CACNA1AO00555 AC092978.1-202ENST00000637590 1327 ntBASIC16.36■□□□□ 0.21
CACNA1AO00555 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.35■□□□□ 0.21
CACNA1AO00555 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CACNA1AO00555 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CACNA1AO00555 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.35■□□□□ 0.21
CACNA1AO00555 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CACNA1AO00555 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA1AO00555 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
CACNA1AO00555 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.35■□□□□ 0.21
CACNA1AO00555 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.35■□□□□ 0.21
CACNA1AO00555 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.35■□□□□ 0.21
CACNA1AO00555 AC004840.1-201ENST00000636359 365 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms